2LBH
Solution Structure of the Dimeric Form of a Unliganded Bovine Neurophysin, Minimized Average Structure
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
2 | 2D 1H-13C HSQC | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
3 | 3D HNCA | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
4 | 3D HN(CO)CA | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
5 | 3D HNCACB | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
6 | 3D HNHA | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
7 | 3D HNCO | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
8 | 3D 1H-15N NOESY | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
9 | 3D 1H-13C NOESY | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
10 | 3D HCCH-TOCSY | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
11 | 2D 1H-15N HSQC | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 10mM 0.15mM | 2.7 | ambient | 314 | |
12 | 2D 1H-15N HSQC | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
2 | Bruker | AVANCE | 600 |
3 | Bruker | AVANCE | 700 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | CNSSOLVE |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 21 |
Representative Model | 1 (minimized average structure) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | CNSSOLVE | 1.0 | Brunger, Adams, Clore, Gros, Nilges and Read |
2 | processing | ARIA | 1.0 | Linge, O'Donoghue and Nilges |
3 | processing | NMRPipe | 1.0 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |
4 | data analysis | TALOS | Cornilescu, Delaglio and Bax | |
5 | data analysis | Sparky | Goddard | |
6 | data analysis | ProcheckNMR | Laskowski and MacArthur |