2M6S
Holo_YqcA
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-15N] protein-1, 30 mM sodium phosphate-2, 50 mM FLAVIN MONONUCLEOTIDE-3, 30 mM sodium chloride-4 | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
2 | 3D CBCA(CO)NH | 1 mM [U-13C; U-15N] protein-5, 30 mM sodium phosphate-6, 50 mM FLAVIN MONONUCLEOTIDE-7, 30 mM sodium chloride-8 | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
3 | 3D HNCO | 1 mM [U-13C; U-15N] protein-5, 30 mM sodium phosphate-6, 50 mM FLAVIN MONONUCLEOTIDE-7, 30 mM sodium chloride-8 | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
4 | 3D HNCA | 1 mM [U-13C; U-15N] protein-5, 30 mM sodium phosphate-6, 50 mM FLAVIN MONONUCLEOTIDE-7, 30 mM sodium chloride-8 | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
5 | 3D HNCACB | 1 mM [U-13C; U-15N] protein-5, 30 mM sodium phosphate-6, 50 mM FLAVIN MONONUCLEOTIDE-7, 30 mM sodium chloride-8 | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
6 | 3D HCCH-COSY | 1 mM [U-13C; U-15N] protein-5, 30 mM sodium phosphate-6, 50 mM FLAVIN MONONUCLEOTIDE-7, 30 mM sodium chloride-8 | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
7 | 3D HCCH-TOCSY | 1 mM [U-13C; U-15N] protein-5, 30 mM sodium phosphate-6, 50 mM FLAVIN MONONUCLEOTIDE-7, 30 mM sodium chloride-8 | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
8 | 3D 1H-15N NOESY | 1 mM [U-15N] protein-1, 30 mM sodium phosphate-2, 50 mM FLAVIN MONONUCLEOTIDE-3, 30 mM sodium chloride-4 | 90% H2O/10% D2O | 7.0 | ambient | 298 | ||
9 | 3D 1H-13C NOESY | 1 mM [U-13C; U-15N] protein-5, 30 mM sodium phosphate-6, 50 mM FLAVIN MONONUCLEOTIDE-7, 30 mM sodium chloride-8 | 90% H2O/10% D2O | 7.0 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | AVANCE | 800 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | CYANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | v2.1 | Guntert, Mumenthaler and Wuthrich |
2 | refinement | Amber | v9 | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman |