2MN6
Solution structure of dimeric TatA of twin-arginine translocation system from E. coli
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 1H-13C NOESY | 0.7 mM [U-99% 13C; U-99% 15N] protein-1, 0.8 mM protein-2, 50 mM sodium phosphate-3, 120 mM [U-2H] DPC-4 | 90% H2O/10% D2O | 0.05 | 7 | ambient | 308 | |
2 | 2D 1H-15N HSQC | 1.2 mM [U-99% 13C; U-99% 15N] protein-5, 50 mM sodium phosphate-6, 100 mM DPC-7 | 90% H2O/10% D2O | 0.05 | 7 | ambient | 308 | |
3 | 2D 1H-13C HSQC | 1.2 mM [U-99% 13C; U-99% 15N] protein-5, 50 mM sodium phosphate-6, 100 mM DPC-7 | 90% H2O/10% D2O | 0.05 | 7 | ambient | 308 | |
4 | 3D 1H-15N NOESY | 1.2 mM [U-99% 13C; U-99% 15N] protein-5, 50 mM sodium phosphate-6, 100 mM DPC-7 | 90% H2O/10% D2O | 0.05 | 7 | ambient | 308 | |
5 | 3D 1H-13C NOESY aliphatic | 0.7 mM [U-99% 13C; U-99% 15N] protein-1, 0.8 mM protein-2, 50 mM sodium phosphate-3, 120 mM [U-2H] DPC-4 | 90% H2O/10% D2O | 0.05 | 7 | ambient | 308 | |
6 | 3D 1H-13C NOESY aliphatic | 1.2 mM [U-99% 13C; U-99% 15N] protein-5, 50 mM sodium phosphate-6, 100 mM DPC-7 | 90% H2O/10% D2O | 0.05 | 7 | ambient | 308 | |
7 | 3D HNCO | 1.2 mM [U-99% 13C; U-99% 15N] protein-5, 50 mM sodium phosphate-6, 100 mM DPC-7 | 90% H2O/10% D2O | 0.05 | 7 | ambient | 308 | |
8 | 3D HNCA | 1.2 mM [U-99% 13C; U-99% 15N] protein-5, 50 mM sodium phosphate-6, 100 mM DPC-7 | 90% H2O/10% D2O | 0.05 | 7 | ambient | 308 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
2 | Bruker | AVANCE | 700 |
3 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | The structure was determined using NOEs from filtered-NOESY spectra |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
2 | data analysis | NMRView | Johnson, One Moon Scientific | |
3 | collection | TopSpin | Bruker Biospin | |
4 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
5 | structure solution | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
6 | data analysis | TALOS | Cornilescu, Delaglio and Bax |