2MPE
Solution NMR structure for B. pseudomallei BPSL1050
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H NOESY | 0.6 mM BPSL1050, 20 mM potassium phosphate, 150 mM sodium chloride, 2 mM DTT, 150 mM [U-100% 2H] DSS | 100% D2O | 0.15 | 6.8 | ambient | 298 | |
2 | 2D 1H-1H NOESY | 0.7 mM BPSL1050, 20 mM potassium phosphate, 150 mM sodium chloride, 2 mM DTT, 150 mM [U-100% 2H] DSS | 90% H2O/10% D2O | 0.15 | 6.8 | ambient | 298 | |
3 | 3D 1H-15N NOESY | 0.7 mM [U-99% 15N] BPSL1050, 20 mM potassium phosphate, 150 mM sodium chloride, 2 mM DTT, 150 mM [U-100% 2H] DSS | 90% H2O/10% D2O | 0.15 | 6.8 | ambient | 298 | |
4 | 3D 1H-13C NOESY | 0.7 mM [U-99% 13C; U-99% 15N] BPSL1050, 20 mM potassium phosphate, 150 mM sodium chloride, 2 mM DTT, 150 mM [U-100% 2H] DSS | 100% D2O | 0.15 | 6.8 | ambient | 298 | |
5 | HN-N Residual dipolar coupling | 0.7 mM [U-99% 15N] BPSL1050, 20 mM potassium phosphate, 150 mM sodium chloride, 2 mM DTT, 150 mM [U-100% 2H] DSS | 90% H2O/10% D2O | 0.15 | 6.8 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, torsion angle dynamics | ARIA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 15 |
Representative Model | 1 (minimized average structure) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | ARIA | Linge, O'Donoghue and Nilges | |
2 | refinement | ARIA | Linge, O'Donoghue and Nilges |