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Structure of Amylase binding Protein A of Streptococcous gordonii: a potential receptor for human salivary amylase enzyme
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 325 uM U-98% 13C, U-98% 15N AbpA 93% H2O/7% D2O 100 5.8 ambient 298 2 2D 1H-13C HSQC 325 uM U-98% 13C, U-98% 15N AbpA 93% H2O/7% D2O 100 5.8 ambient 298 3 3D HNCACB 325 uM U-98% 13C, U-98% 15N AbpA 93% H2O/7% D2O 100 5.8 ambient 298 4 3D HNCACO 325 uM U-98% 13C, U-98% 15N AbpA 93% H2O/7% D2O 100 5.8 ambient 298 5 3D CccoNH 325 uM U-98% 13C, U-98% 15N AbpA 93% H2O/7% D2O 100 5.8 ambient 298 6 3D HcccoNH 325 uM U-98% 13C, U-98% 15N AbpA 93% H2O/7% D2O 100 5.8 ambient 298 7 3D 15N resolved [1H,1H]-NOESY 325 uM U-98% 13C, U-98% 15N AbpA 93% H2O/7% D2O 100 5.8 ambient 298 8 3D 13Cali resolved [1H,1H]-NOESY 325 uM U-98% 13C, U-98% 15N AbpA 93% H2O/7% D2O 100 5.8 ambient 298 9 3D 13Caro resolved [1H,1H]-NOESY 325 uM U-98% 13C, U-98% 15N AbpA 93% H2O/7% D2O 100 5.8 ambient 298 10 2D 15N{1H}-NOE 325 uM U-98% 13C, U-98% 15N AbpA 93% H2O/7% D2O 100 5.8 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700 2 Bruker AVANCE 800
NMR Refinement Method Details Software torsion angle dynamics, energy minimization TopSpin
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 80 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 data collection TopSpin 3.2 Bruker Biospin 2 processing TopSpin 3.2 Bruker Biospin 3 chemical shift assignment CARA 1.5.3 Keller and Wuthrich 4 peak picking CARA 1.5.3 Keller and Wuthrich 5 peak picking UNIO 2.0.1 Herrmann and Wuthrich 6 noe assignment UNIO 2.0.1 Herrmann and Wuthrich 7 structure solution UNIO 2.0.1 Herrmann and Wuthrich 8 structure calculation CYANA 3.0 Guntert, Mumenthaler and Wuthrich 9 refinement OPALp 1.2 Koradi,Billeter and Guntert