2PQE
Solution structure of proline-free mutant of staphylococcal nuclease
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D HNCACB | 1 mM [Pro-]SNase, 100 mM KCl and 50 mM deuterated acetate buffer, pH 5.0 | 90% H2O/10% D2O | 100 mM KCl | 5.0 | ambient | 300 | |
2 | 3D CBCA(CO)NH | 1 mM [Pro-]SNase, 100 mM KCl and 50 mM deuterated acetate buffer, pH 5.0 | 90% H2O/10% D2O | 100 mM KCl | 5.0 | ambient | 300 | |
3 | 3D HNCA | 1 mM [Pro-]SNase, 100 mM KCl and 50 mM deuterated acetate buffer, pH 5.0 | 90% H2O/10% D2O | 100 mM KCl | 5.0 | ambient | 300 | |
4 | 3D HN(CO)CA | 1 mM [Pro-]SNase, 100 mM KCl and 50 mM deuterated acetate buffer, pH 5.0 | 90% H2O/10% D2O | 100 mM KCl | 5.0 | ambient | 300 | |
5 | 3D HNCO | 1 mM [Pro-]SNase, 100 mM KCl and 50 mM deuterated acetate buffer, pH 5.0 | 90% H2O/10% D2O | 100 mM KCl | 5.0 | ambient | 300 | |
6 | 3D HCCH-TOCSY | 1 mM [Pro-]SNase, 100 mM KCl and 50 mM deuterated acetate buffer, pH 5.0 | 90% H2O/10% D2O | 100 mM KCl | 5.0 | ambient | 300 | |
7 | 3D 1H-15N NOESY-HSQC | 1 mM [Pro-]SNase, 100 mM KCl and 50 mM deuterated acetate buffer, pH 5.0 | 90% H2O/10% D2O | 100 mM KCl | 5.0 | ambient | 300 | |
8 | 3D 1H-13C NOESY-HSQC | 1 mM [Pro-]SNase, 100 mM KCl and 50 mM deuterated acetate buffer, pH 5.0 | 90% H2O/10% D2O | 100 mM KCl | 5.0 | ambient | 300 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | XwinNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 21 |
Representative Model | 1 (minimized average structure) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 3.5 | Bruker |
2 | data analysis | Felix | 98 | MSI/Accelrys Inc. |
3 | refinement | CNS | 1.1 | Brunger |
4 | structure solution | CNS | 1.1 | Brunger |