2RU3
Solution structure of c.elegans SUP-12 RRM in complex with RNA
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.6 mM [U-100% 13C; U-100% 15N] SUP-12-1, 0.72 mM RNA-2 | 90% H2O/10% D2O | 0.1 | 5-7 | ambient | 298 | |
2 | 3D HNCA | 0.6 mM [U-100% 13C; U-100% 15N] SUP-12-1, 0.72 mM RNA-2 | 90% H2O/10% D2O | 0.1 | 5-7 | ambient | 298 | |
3 | 3D HN(CO)CA | 0.6 mM [U-100% 13C; U-100% 15N] SUP-12-1, 0.72 mM RNA-2 | 90% H2O/10% D2O | 0.1 | 5-7 | ambient | 298 | |
4 | 3D HNCACB | 0.6 mM [U-100% 13C; U-100% 15N] SUP-12-1, 0.72 mM RNA-2 | 90% H2O/10% D2O | 0.1 | 5-7 | ambient | 298 | |
5 | 3D CBCA(CO)NH | 0.6 mM [U-100% 13C; U-100% 15N] SUP-12-1, 0.72 mM RNA-2 | 90% H2O/10% D2O | 0.1 | 5-7 | ambient | 298 | |
6 | 2D 1H-13C HSQC | 0.6 mM [U-100% 13C; U-100% 15N] SUP-12-1, 0.72 mM RNA-2 | 90% H2O/10% D2O | 0.1 | 5-7 | ambient | 298 | |
7 | 3D HBHA(CO)NH | 0.6 mM [U-100% 13C; U-100% 15N] SUP-12-1, 0.72 mM RNA-2 | 90% H2O/10% D2O | 0.1 | 5-7 | ambient | 298 | |
8 | 3D C(CO)NH | 0.6 mM [U-100% 13C; U-100% 15N] SUP-12-1, 0.72 mM RNA-2 | 90% H2O/10% D2O | 0.1 | 5-7 | ambient | 298 | |
9 | 3D H(CCO)NH | 0.6 mM [U-100% 13C; U-100% 15N] SUP-12-1, 0.72 mM RNA-2 | 90% H2O/10% D2O | 0.1 | 5-7 | ambient | 298 | |
10 | 3D 1H-15N NOESY | 0.6 mM [U-100% 13C; U-100% 15N] SUP-12-1, 0.72 mM RNA-2 | 90% H2O/10% D2O | 0.1 | 5-7 | ambient | 298 | |
11 | 3D 1H-13C NOESY | 0.6 mM [U-100% 13C; U-100% 15N] SUP-12-1, 0.72 mM RNA-2 | 90% H2O/10% D2O | 0.1 | 5-7 | ambient | 298 | |
12 | 2D 1H-1H NOESY | 0.6 mM [U-100% 13C; U-100% 15N] SUP-12-1, 0.72 mM RNA-2 | 90% H2O/10% D2O | 0.1 | 5-7 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | AVANCE | 700 |
3 | Bruker | AVANCE | 800 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | Amber |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | Amber | 9 | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman |