X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelOtherEXPERIMENTALLY PHASED STRUCTURE FROM ANOTHER CRYSTAL OF THE SAME CONSTRUCT

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
10.1 M SPG, 60% MPG
Crystal Properties
Matthews coefficientSolvent content
2.6261.96

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 78.661α = 90
b = 78.775β = 90
c = 79.86γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2008-05-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X10SASLSX10SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.835.1897.10.075.983.484527619.5
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.81.982.90.362.182.49

Refinement

Statistics
Diffraction IDStructure Solution MethodStarting modelResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTEXPERIMENTALLY PHASED STRUCTURE FROM ANOTHER CRYSTAL OF THE SAME CONSTRUCT1.832.4450.0280685354890.820.14780.14680.169126.36
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.3663-4.112.7437
RMS Deviations
KeyRefinement Restraint Deviation
f_dihedral_angle_d16.14
f_angle_d1.09
f_chiral_restr0.1
f_bond_d0.01
f_plane_restr
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2617
Nucleic Acid Atoms
Solvent Atoms398
Heterogen Atoms34

Software

Software
Software NamePurpose
PHENIXrefinement
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing