6K2K
Solution structure of MUL1-RING domain
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
2 | 3D HNCACB | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
3 | 3D CBCA(CO)NH | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
4 | 3D HNCO | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
5 | 3D HN(CA)CO | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
6 | 3D HCCH-TOCSY | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
7 | 3D CCH-TOCSY | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
8 | 3D HCCH-COSY | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
9 | 3D CC(CO)NH | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
10 | 3D HBHA(CO)NH | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
11 | 3D HBCBCGCDHD | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
12 | 3D HBCBCGCDHDHE | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
13 | 3D NOESY | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
14 | 2D 1H-15N HSQC | 0.9 mM [U-99% 13C; U-99% 15N] Mitochondrial ubiquitin ligase activator of NFKB 1 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE II 900 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE II | 900 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | X-PLOR NIH |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 250 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (minimized average structure) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
2 | structure calculation | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
3 | chemical shift assignment | Sparky | Goddard | |
4 | peak picking | Sparky | Goddard | |
5 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |