6XRG
Abl 1b isoform inactive2 state
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-13C HSQC aromatic | 250 uM N-ILVMAT-FY Abl 1b G269E/M309L/T408Y variant, 25 mM sodium phosphate, 75 mM sodium chloride, 2.5 mM beta-mercaptoethanol | 90% H2O/10% D2O | 100 mM | 7.7 | 1 atm | 283 | Bruker AVANCE 1100 |
2 | 2D 1H-13C HMQC | 250 uM N-ILVMAT-FY Abl 1b G269E/M309L/T408Y variant, 25 mM sodium phosphate, 75 mM sodium chloride, 2.5 mM beta-mercaptoethanol | 90% H2O/10% D2O | 100 mM | 7.7 | 1 atm | 283 | Bruker AVANCE 1100 |
3 | 2D 1H-15N TROSY | 250 uM N-ILVMAT-FY Abl 1b G269E/M309L/T408Y variant, 25 mM sodium phosphate, 75 mM sodium chloride, 2.5 mM beta-mercaptoethanol | 90% H2O/10% D2O | 100 mM | 7.7 | 1 atm | 283 | Bruker AVANCE 850 |
11 | 3D 1H-15N NOESY | 250 uM N-ILVMAT-FY Abl 1b G269E/M309L/T408Y variant, 25 mM sodium phosphate, 75 mM sodium chloride, 2.5 mM beta-mercaptoethanol | 90% H2O/10% D2O | 100 mM | 7.7 | 1 atm | 283 | Bruker AVANCE 850 |
10 | 3D 1H-13C NOESY aliphatic | 250 uM N-ILVMAT-FY Abl 1b G269E/M309L/T408Y variant, 25 mM sodium phosphate, 75 mM sodium chloride, 2.5 mM beta-mercaptoethanol | 90% H2O/10% D2O | 100 mM | 7.7 | 1 atm | 283 | Bruker AVANCE 1100 |
9 | 3D 1H-13C NOESY aromatic | 250 uM N-ILVMAT-FY Abl 1b G269E/M309L/T408Y variant, 25 mM sodium phosphate, 75 mM sodium chloride, 2.5 mM beta-mercaptoethanol | 90% H2O/10% D2O | 100 mM | 7.7 | 1 atm | 283 | Bruker AVANCE 1100 |
8 | 3D CCH NOESY | 250 uM N-ILVMAT-FY Abl 1b G269E/M309L/T408Y variant, 25 mM sodium phosphate, 75 mM sodium chloride, 2.5 mM beta-mercaptoethanol | 90% H2O/10% D2O | 100 mM | 7.7 | 1 atm | 283 | Bruker AVANCE 1100 |
6 | 3D CaCmHm_sofastNOESY | 250 uM N-ILVMAT-FY Abl 1b G269E/M309L/T408Y variant, 25 mM sodium phosphate, 75 mM sodium chloride, 2.5 mM beta-mercaptoethanol | 90% H2O/10% D2O | 100 mM | 7.7 | 1 atm | 283 | Bruker AVANCE 1100 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 1100 |
2 | Bruker | AVANCE | 850 |
NMR Refinement | ||
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Method | Details | Software |
molecular dynamics | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
2 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
3 | chemical shift assignment | I-PINE | Lee, Bahrami, Dashti, Eghbalnia, Tonelli, Westler and Markley | |
4 | peak picking | Sparky | Goddard | |
8 | geometry optimization | TALOS | Cornilescu, Delaglio and Bax | |
7 | refinement | PSVS | Bhattacharya and Montelione | |
6 | collection | TopSpin | Bruker Biospin | |
5 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |