☰ Navigation Tabs
NOE-only solution structure of the Iron-Sulfur protein PioC from Rhodopseudomonas palustris TIE-1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 500 uM [U-15N] PioC 90% H2O/10% D2O 300 mM 5.6 1 atm 298 Bruker AVANCE 500 2 3D HNCO 500 uM [U-13C; U-15N] PioC 90% H2O/10% D2O 300 mM 5.6 1 atm 298 Bruker AVANCE 700 3 3D HNCACB 500 uM [U-13C; U-15N] PioC 90% H2O/10% D2O 300 mM 5.6 1 atm 298 Bruker AVANCE 700 4 3D 1H-15N NOESY 500 uM [U-13C; U-15N] PioC 90% H2O/10% D2O 300 mM 5.6 1 atm 298 Bruker AVANCE 950 5 3D HN(COCA)CB 500 uM [U-13C; U-15N] PioC 90% H2O/10% D2O 300 mM 5.6 1 atm 298 Bruker AVANCE 700 7 3D HNCACO 500 uM [U-13C; U-15N] PioC 90% H2O/10% D2O 300 mM 5.6 1 atm 298 Bruker AVANCE 700 6 3D 1H-13C NOESY aliphatic 500 uM [U-13C; U-15N] PioC 90% H2O/10% D2O 300 mM 5.6 1 atm 298 Bruker AVANCE III 900
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600 2 Bruker AVANCE 400 5 Bruker AVANCE III 900 4 Bruker AVANCE 500 3 Bruker AVANCE 950 6 Bruker AVANCE 700
NMR Refinement Method Details Software torsion angle dynamics CYANA molecular dynamics Amber
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 2000 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber 16 Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 2 structure calculation CYANA 2.1 Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment CARA Keller and Wuthrich 4 processing TopSpin 3.6 Bruker Biospin 5 refinement PROCHECK / PROCHECK-NMR Laskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton