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GqqA- a novel type of quorum quenching acylases
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 291 10% PEG3350
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 59.627 α = 90 b = 62.853 β = 90 c = 95.935 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2018-06-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PETRA III, DESY BEAMLINE P11 0.9801 PETRA III, DESY P11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.67 50 99.7 0.06 0.99 21.9 6.82 79955
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Rrim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.67 1.78 98 0.61 0.92 3.36 6.67
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.67 43.3 40018 2107 99.69 0.15919 0.15782 0.18552 0.1852 RANDOM 22.756
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.33 -0.76 1.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.522 r_dihedral_angle_4_deg 20.027 r_dihedral_angle_3_deg 11.319 r_long_range_B_refined 6.36 r_long_range_B_other 6.234 r_dihedral_angle_1_deg 6.14 r_scangle_other 4.58 r_scbond_it 3.255 r_scbond_other 3.255 r_mcangle_it 2.377
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.522 r_dihedral_angle_4_deg 20.027 r_dihedral_angle_3_deg 11.319 r_long_range_B_refined 6.36 r_long_range_B_other 6.234 r_dihedral_angle_1_deg 6.14 r_scangle_other 4.58 r_scbond_it 3.255 r_scbond_other 3.255 r_mcangle_it 2.377 r_mcangle_other 2.376 r_angle_refined_deg 1.789 r_mcbond_it 1.673 r_mcbond_other 1.672 r_angle_other_deg 1.178 r_chiral_restr 0.116 r_bond_refined_d 0.017 r_gen_planes_refined 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3006 Nucleic Acid Atoms Solvent Atoms 395 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling Auto-Rickshaw phasing