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Interactive model building was performed in Coot using an auto sharpened map in cryoSPARC and additionally a low-pass-filtered map to 4 Angstrom for ...
Interactive model building was performed in Coot using an auto sharpened map in cryoSPARC and additionally a low-pass-filtered map to 4 Angstrom for the more mobile regions of the 60S structure. Each residue of the model was checked individually for modifications and adjusted manually with a subsequent refinement in phenix.refine. Polyamines and metals were added while searching for unmodelled blobs in Coot. Water molecules were added using phenix.douse and visually validated in Coot. The model was validated using Molprobity.