Ligand validation:1GPK

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 1GPK designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
1GPK_NAG_A_1536	11%	66%	0.279	0.801	0.65	0.67	-	-	0	0	100%	0.9333
1GPK_NAG_A_1539	3%	64%	0.432	0.786	0.63	0.74	-	-	0	0	100%	0.4667
6G1U_NAG_B_602	82%	89%	0.085	0.938	0.25	0.39	-	-	0	0	100%	0.9333
6EZH_NAG_B_602	76%	73%	0.103	0.94	0.54	0.51	-	-	0	0	100%	0.9333
2VJB_NAG_B_1536	75%	67%	0.103	0.935	0.5	0.75	-	1	0	0	100%	0.9333
2VJD_NAG_B_1537	73%	69%	0.09	0.917	0.55	0.63	-	-	2	0	100%	0.9333
6G1V_NAG_B_602	71%	84%	0.088	0.907	0.32	0.44	-	-	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_A_601	100%	70%	0.024	0.993	0.3	0.85	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.