UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
UMP is a Ligand Of Interest in 1O25 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1O25_UMP_A_603 | 80% | 9% | 0.065 | 0.959 | 2.14 | 2.25 | 9 | 7 | 4 | 0 | 100% | 1 |
| 1O25_UMP_B_608 | 76% | 11% | 0.07 | 0.954 | 1.98 | 2.19 | 7 | 5 | 1 | 0 | 100% | 1 |
| 1O25_UMP_C_613 | 71% | 9% | 0.074 | 0.937 | 2.15 | 2.3 | 8 | 8 | 2 | 0 | 100% | 1 |
| 1O25_UMP_D_618 | 34% | 8% | 0.119 | 0.834 | 2.11 | 2.45 | 7 | 9 | 2 | 0 | 100% | 1 |
| 5IOT_UMP_B_302 | 94% | 24% | 0.043 | 0.981 | 1.4 | 1.74 | 4 | 6 | 0 | 0 | 100% | 1 |
| 4GTF_UMP_A_302 | 93% | 42% | 0.048 | 0.985 | 0.97 | 1.21 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5IOS_UMP_A_303 | 92% | 30% | 0.045 | 0.977 | 1.32 | 1.5 | 3 | 4 | 1 | 0 | 100% | 1 |
| 4GTA_UMP_A_302 | 92% | 28% | 0.05 | 0.985 | 1.17 | 1.7 | 2 | 4 | 0 | 0 | 100% | 0.89 |
| 4GTB_UMP_A_302 | 90% | 41% | 0.055 | 0.983 | 0.94 | 1.28 | - | 5 | 0 | 0 | 100% | 1 |
| 4XSD_UMP_B_1001 | 100% | 5% | 0.018 | 0.998 | 3.69 | 1.69 | 9 | 6 | 4 | 0 | 100% | 1 |
| 4EIL_UMP_B_701 | 99% | 2% | 0.025 | 0.995 | 1.26 | 5.29 | 4 | 15 | 7 | 0 | 100% | 1 |
| 4KYA_UMP_A_701 | 99% | 15% | 0.028 | 0.995 | 1.59 | 2.09 | 3 | 11 | 0 | 0 | 100% | 1 |
| 2BSY_UMP_A_1257 | 98% | 52% | 0.03 | 0.989 | 0.79 | 0.91 | - | 2 | 0 | 0 | 100% | 1 |
| 4EB4_UMP_B_401 | 97% | 29% | 0.034 | 0.988 | 1.11 | 1.71 | 2 | 5 | 3 | 0 | 100% | 1 |














