NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 1PXX designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1PXX_NAG_C_2661Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1PXX_NAG_C_2661Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1PXX_NAG_C_2661Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1PXX_NAG_C_2661 18% 68% 0.151 0.7340.61 0.63 - -90100%1
1PXX_NAG_C_2681 18% 61% 0.169 0.7510.48 1 - 100100%1
1PXX_NAG_A_661 15% 69% 0.178 0.7370.56 0.64 - -70100%1
1PXX_NAG_D_3681 15% 65% 0.217 0.7750.48 0.86 - -00100%1
1PXX_NAG_A_681 11% 65% 0.183 0.6970.6 0.75 - -00100%1
1PXX_NAG_B_1681 11% 67% 0.215 0.7280.47 0.81 - -00100%1
1PXX_NAG_B_1661 7% 69% 0.212 0.670.49 0.68 - -80100%1
1PXX_NAG_D_3661 6% 60% 0.186 0.6160.74 0.8 - 160100%1
6OFY_NAG_B_602 88% 26% 0.085 0.9621.43 1.55 2 600100%1
3RR3_NAG_B_671 83% 48% 0.081 0.9510.68 1.31 - 24093%1
6BL4_NAG_C_705 80% 83% 0.107 0.9570.32 0.46 - -00100%1
3Q7D_NAG_B_671 70% 40% 0.112 0.9420.8 1.53 1 45093%1
4OTJ_NAG_C_704 68% 83% 0.095 0.9050.35 0.43 - -00100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1