GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 1RPN designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1RPN_GDP_C_1603 | 94% | 48% | 0.068 | 0.974 | 0.79 | 1.09 | 1 | 5 | 0 | 0 | 100% | 1 |
| 1RPN_GDP_D_1604 | 92% | 48% | 0.072 | 0.97 | 0.83 | 1.06 | 1 | 5 | 0 | 0 | 100% | 1 |
| 1RPN_GDP_B_1602 | 90% | 47% | 0.077 | 0.965 | 0.84 | 1.08 | 1 | 4 | 0 | 0 | 100% | 1 |
| 1RPN_GDP_A_1601 | 47% | 51% | 0.193 | 0.937 | 0.83 | 0.94 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
