PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 1WYU designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1WYU_PLP_D_475Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1WYU_PLP_D_475Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1WYU_PLP_D_475Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1WYU_PLP_D_475 81% 18% 0.108 0.961.6 1.94 4 310100%1
1WYU_PLP_B_475 80% 17% 0.126 0.9741.65 1.92 4 410100%1
1WYU_PLP_H_475 77% 18% 0.126 0.9671.63 1.86 4 310100%1
1WYU_PLP_F_475 77% 18% 0.137 0.9781.61 1.89 4 310100%1
1WYV_PLP_F_3475 44% 17% 0.216 0.9571.67 1.9 3 30094%1
1EKV_PLP_A_370 100% 19% 0.019 0.9982 1.45 5 41094%1
2BIE_PLP_B_1361 100% 28% 0.039 0.9891.48 1.39 4 310100%1
4NOG_PLP_A_501 100% 38% 0.042 0.9921.24 1.18 3 100100%1
3WQC_PLP_B_402 100% 21% 0.045 0.9931.96 1.38 4 400100%1
4HT3_PLP_B_401 100% 15% 0.045 0.9932.04 1.72 3 500100%1