1YQD


NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

NAP is a Ligand Of Interest in 1YQD designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1YQD_NAP_A_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1YQD_NAP_A_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1YQD_NAP_A_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1YQD_NAP_A_500 67% 3% 0.111 0.9183.49 2.51 18 19 60100%1
1YQD_NAP_B_600 66% 3% 0.114 0.9183.45 2.51 18 19 50100%1
1YQX_NAP_A_500 72% 3% 0.129 0.9523.67 2.57 19 19 30100%1
2DBQ_NAP_A_401 100% 24% 0.017 0.9981.42 1.71 7 1600100%1
2EXX_NAP_A_3698 100% 10% 0.025 0.9961.63 2.7 7 18 90100%1
2X9G_NAP_B_1269 100% 46% 0.031 0.9970.96 1.14 1 500100%1
2J8T_NAP_A_1316 100% 49% 0.033 0.9960.97 1.01 3 210100%1
3LQL_NAP_A_500 100% 43% 0.035 0.9961.13 1.07 3 410100%1