1YYM
NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 1YYM designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1YYM_NAG_G_762 | 68% | 68% | 0.145 | 0.956 | 0.46 | 0.75 | - | 1 | 3 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1762 | 58% | 67% | 0.129 | 0.906 | 0.47 | 0.79 | - | - | 2 | 0 | 100% | 0.9333 |
1YYM_NAG_G_789 | 51% | 70% | 0.139 | 0.892 | 0.49 | 0.66 | - | - | 1 | 0 | 100% | 0.9333 |
1YYM_NAG_G_795 | 49% | 69% | 0.145 | 0.893 | 0.53 | 0.66 | - | 1 | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1588 | 46% | 68% | 0.141 | 0.875 | 0.58 | 0.65 | - | - | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_G_776 | 34% | 69% | 0.174 | 0.855 | 0.45 | 0.75 | - | 1 | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1789 | 25% | 64% | 0.186 | 0.821 | 0.56 | 0.81 | - | 1 | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_G_588 | 22% | 67% | 0.224 | 0.843 | 0.57 | 0.7 | - | - | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_G_886 | 19% | 57% | 0.192 | 0.784 | 0.72 | 0.91 | - | 1 | 2 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1886 | 17% | 65% | 0.195 | 0.77 | 0.52 | 0.81 | - | 1 | 3 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1795 | 16% | 66% | 0.189 | 0.757 | 0.56 | 0.76 | - | 1 | 1 | 0 | 100% | 0.9333 |
1YYM_NAG_G_734 | 5% | 69% | 0.315 | 0.727 | 0.58 | 0.61 | - | - | 0 | 1 | 100% | 0.9333 |
1YYM_NAG_P_1776 | 4% | 66% | 0.251 | 0.635 | 0.66 | 0.64 | - | - | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1734 | 3% | 73% | 0.292 | 0.646 | 0.49 | 0.56 | - | - | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_G_741 | 3% | 65% | 0.363 | 0.707 | 0.56 | 0.77 | - | 1 | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1741 | 2% | 68% | 0.332 | 0.627 | 0.62 | 0.61 | - | - | 1 | 0 | 100% | 0.9333 |
2I5Y_NAG_G_762 | 83% | 69% | 0.099 | 0.957 | 0.47 | 0.7 | - | - | 1 | 0 | 100% | 0.9333 |
1RZK_NAG_G_762 | 77% | 65% | 0.115 | 0.956 | 0.62 | 0.73 | - | 1 | 0 | 0 | 100% | 0.9333 |
1YYL_NAG_G_762 | 69% | 68% | 0.127 | 0.94 | 0.54 | 0.7 | - | - | 1 | 0 | 100% | 0.9333 |
2I60_NAG_G_789 | 67% | 69% | 0.109 | 0.918 | 0.45 | 0.72 | - | - | 0 | 0 | 100% | 0.9333 |
4RQS_NAG_G_524 | 42% | 67% | 0.102 | 0.82 | 0.49 | 0.78 | - | - | 0 | 0 | 100% | 0.9333 |
3H0C_NAG_A_794 | 100% | 56% | 0.021 | 0.995 | 0.61 | 1.08 | - | 1 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |