UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 2FFV designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2FFV_UDP_A_5601 | 72% | 7% | 0.143 | 0.972 | 2.67 | 2.13 | 8 | 11 | 1 | 0 | 100% | 1 |
| 2FFV_UDP_B_9601 | 67% | 6% | 0.144 | 0.956 | 2.79 | 2.18 | 7 | 12 | 1 | 0 | 100% | 1 |
| 6E7I_UDP_A_601 | 98% | 25% | 0.053 | 0.987 | 1.4 | 1.55 | 4 | 7 | 0 | 0 | 100% | 1 |
| 5AJP_UDP_A_1570 | 97% | 34% | 0.056 | 0.982 | 1.01 | 1.49 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5NDF_UDP_A_602 | 95% | 31% | 0.071 | 0.984 | 1.07 | 1.58 | 1 | 7 | 0 | 0 | 100% | 1 |
| 2FFU_UDP_A_601 | 95% | 8% | 0.059 | 0.97 | 2.57 | 2.07 | 6 | 10 | 0 | 0 | 100% | 1 |
| 4D0T_UDP_C_1571 | 86% | 30% | 0.107 | 0.984 | 1.17 | 1.52 | 3 | 8 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_D_401 | 100% | 3% | 0.012 | 0.999 | 3.38 | 2.71 | 14 | 13 | 1 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.3 | 2.73 | 13 | 14 | 0 | 0 | 100% | 1 |
| 8VH8_UDP_B_704 | 100% | 57% | 0.03 | 0.994 | 0.59 | 0.91 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 40% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 99% | 34% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
