PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 2VIB designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2VIB_PLP_A_1406 | 93% | 41% | 0.06 | 0.972 | 1.07 | 1.13 | 2 | 2 | 2 | 0 | 94% | 1 |
| 2VMQ_PLP_A_501 | 99% | 43% | 0.035 | 0.99 | 1.05 | 1.05 | 2 | 3 | 1 | 0 | 94% | 1 |
| 2VGT_PLP_A_1406 | 99% | 41% | 0.033 | 0.987 | 1.08 | 1.11 | 1 | 2 | 1 | 0 | 94% | 1 |
| 2W7J_PLP_A_501 | 98% | 45% | 0.038 | 0.986 | 1.05 | 0.97 | 2 | 1 | 1 | 0 | 94% | 1 |
| 2VMW_PLP_A_501 | 98% | 46% | 0.039 | 0.984 | 1.05 | 0.94 | 2 | 2 | 1 | 0 | 94% | 1 |
| 1YJZ_PLP_A_501 | 97% | 5% | 0.048 | 0.986 | 1.71 | 3.49 | 4 | 11 | 3 | 0 | 94% | 1 |
| 1WBJ_PLP_B_1392 | 100% | 26% | 0.01 | 0.999 | 1.31 | 1.6 | 1 | 2 | 0 | 0 | 100% | 1 |
| 3L6C_PLP_A_350 | 100% | 26% | 0.015 | 0.999 | 1.15 | 1.75 | 2 | 6 | 0 | 0 | 100% | 1 |
| 5CE8_PLP_A_301 | 100% | 9% | 0.013 | 0.999 | 3.01 | 1.47 | 6 | 3 | 1 | 0 | 100% | 1 |
| 7KMC_PLP_B_401 | 100% | 45% | 0.014 | 0.999 | 0.93 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |
| 1ASM_PLP_A_410 | 100% | 15% | 0.017 | 0.998 | 1.78 | 1.89 | 4 | 6 | 3 | 0 | 100% | 1 |
