2YD0 | pdb_00002yd0


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 2YD0 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2YD0_NAG_A_1943 15% 19% 0.144 0.710.94 2.39 - 600100%1
3MDJ_NAG_A_6000 25% 36% 0.187 0.8250.93 1.46 1 300100%1
3QNF_NAG_B_1070 25% 61% 0.234 0.8750.42 0.91 - -00100%1
6RYF_NAG_A_1034 1% 67% 0.319 0.552 0.58 0.53 - -00100%1
6RQX_NAG_A_1010 1% 82% 0.376 0.6090.16 0.57 - -00100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.55 0.64 - -30100%1
3H0C_NAG_A_796 100% 55% 0.02 0.9950.47 1.12 - 100100%1
5O5D_NAG_B_501 100% 60% 0.02 0.9950.38 0.97 - 100100%1
9OAR_NAG_C_202 100% 52% 0.021 0.9940.68 1.06 - 100100%1
6MUG_NAG_G_629 100% 72% 0.022 0.9940.35 0.58 - -00100%1