NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 2YQ2 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2YQ2_NAG_A_1000Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2YQ2_NAG_A_1000Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2YQ2_NAG_A_1000Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2YQ2_NAG_A_1000 73% 72% 0.087 0.9140.28 0.79 - -00100%1
2YQ2_NAG_B_1001 54% 84% 0.108 0.8710.27 0.49 - -00100%1
2YQ2_NAG_B_1002 43% 46% 0.143 0.8670.44 1.63 - 200100%1
2YQ2_NAG_B_1000 29% 79% 0.15 0.8090.29 0.58 - -00100%1
2YQ2_NAG_A_1002 17% 74% 0.117 0.6950.28 0.73 - 100100%1
2YQ2_NAG_A_1001 0% 72% 0.182 0.178 0.33 0.74 - 100100%1
2YQ3_NAG_B_1001 38% 71% 0.22 0.9240.27 0.84 - 100100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1