3GND
5RP: RIBULOSE-5-PHOSPHATE
5RP is a Ligand Of Interest in 3GND designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
3GND_5RP_B_984 | 55% | 24% | 0.18 | 0.951 | 1.87 | 1.29 | 3 | 2 | 4 | 0 | 100% | 1 |
3GND_5RP_A_984 | 53% | 22% | 0.184 | 0.947 | 1.71 | 1.56 | 2 | 3 | 4 | 0 | 100% | 1 |
3GND_5RP_Q_984 | 52% | 18% | 0.188 | 0.948 | 1.95 | 1.6 | 3 | 3 | 4 | 0 | 100% | 1 |
3GND_5RP_F_984 | 50% | 17% | 0.187 | 0.938 | 2 | 1.6 | 2 | 3 | 3 | 0 | 100% | 1 |
3GND_5RP_S_984 | 48% | 16% | 0.179 | 0.921 | 2.02 | 1.67 | 2 | 4 | 4 | 0 | 100% | 1 |
3GND_5RP_E_984 | 44% | 17% | 0.199 | 0.928 | 2.01 | 1.64 | 2 | 4 | 4 | 0 | 100% | 1 |
3GND_5RP_H_984 | 42% | 21% | 0.214 | 0.935 | 1.78 | 1.53 | 2 | 3 | 4 | 0 | 100% | 1 |
3GND_5RP_R_984 | 42% | 19% | 0.206 | 0.926 | 1.98 | 1.49 | 2 | 3 | 4 | 0 | 100% | 1 |
3GND_5RP_O_984 | 41% | 22% | 0.218 | 0.935 | 2.06 | 1.23 | 2 | 1 | 4 | 0 | 100% | 1 |
3GND_5RP_N_984 | 41% | 18% | 0.213 | 0.929 | 2.03 | 1.5 | 3 | 2 | 4 | 0 | 100% | 1 |
3GND_5RP_G_984 | 37% | 18% | 0.225 | 0.926 | 1.92 | 1.6 | 3 | 3 | 3 | 0 | 100% | 1 |
3GND_5RP_T_984 | 37% | 21% | 0.222 | 0.922 | 1.85 | 1.47 | 3 | 2 | 3 | 0 | 100% | 1 |
3GND_5RP_K_984 | 37% | 19% | 0.228 | 0.928 | 1.73 | 1.71 | 2 | 3 | 3 | 0 | 100% | 1 |
3GND_5RP_C_984 | 36% | 18% | 0.207 | 0.9 | 1.96 | 1.55 | 3 | 2 | 4 | 0 | 100% | 1 |
3GND_5RP_I_984 | 34% | 17% | 0.219 | 0.901 | 1.9 | 1.68 | 3 | 4 | 4 | 0 | 100% | 1 |
3GND_5RP_L_984 | 31% | 16% | 0.247 | 0.918 | 2.07 | 1.63 | 3 | 4 | 4 | 0 | 100% | 1 |
3GND_5RP_M_984 | 29% | 17% | 0.252 | 0.913 | 1.82 | 1.76 | 2 | 3 | 4 | 0 | 100% | 1 |
3GND_5RP_D_984 | 26% | 21% | 0.254 | 0.899 | 1.86 | 1.48 | 3 | 2 | 4 | 0 | 100% | 1 |
3GND_5RP_J_984 | 26% | 20% | 0.291 | 0.936 | 2 | 1.39 | 2 | 2 | 4 | 0 | 100% | 1 |
3GND_5RP_P_984 | 16% | 16% | 0.282 | 0.854 | 1.97 | 1.74 | 2 | 3 | 3 | 0 | 100% | 1 |
6MU0_5RP_A_201 | 100% | 73% | 0.046 | 0.992 | 0.32 | 0.7 | - | - | 0 | 0 | 100% | 1 |
2VVP_5RP_D_300 | 98% | 60% | 0.062 | 0.987 | 0.51 | 1.01 | - | - | 1 | 0 | 100% | 0.5 |
6MC0_5RP_B_301 | 98% | 61% | 0.063 | 0.984 | 0.42 | 1.04 | - | 1 | 2 | 0 | 100% | 1 |
1XBX_5RP_B_502 | 97% | 27% | 0.062 | 0.987 | 1.42 | 1.53 | 2 | 2 | 0 | 0 | 93% | 1 |
1SNN_5RP_B_501 | 96% | 40% | 0.07 | 0.981 | 1.44 | 0.92 | 1 | - | 0 | 0 | 100% | 1 |