3PDU


NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

NAP is a Ligand Of Interest in 3PDU designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3PDU_NAP_A_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3PDU_NAP_A_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3PDU_NAP_A_301 94% 29% 0.076 0.9761.61 1.26 3 430100%1
3PDU_NAP_F_301 94% 32% 0.077 0.9741.58 1.14 3 200100%1
3PDU_NAP_C_301 93% 27% 0.074 0.9691.65 1.28 4 400100%1
3PDU_NAP_H_301 93% 28% 0.077 0.9721.6 1.28 3 400100%1
3PDU_NAP_E_301 91% 29% 0.083 0.9711.61 1.22 3 200100%1
3PDU_NAP_D_301 87% 28% 0.094 0.9661.65 1.26 3 520100%1
3PDU_NAP_B_301 86% 29% 0.094 0.9611.66 1.19 3 400100%1
3PDU_NAP_G_301 66% 29% 0.118 0.9221.64 1.2 3 400100%1
2DBQ_NAP_A_401 100% 24% 0.017 0.9981.42 1.71 7 1600100%1
2EXX_NAP_A_3698 100% 10% 0.025 0.9961.63 2.7 7 18 90100%1
2X9G_NAP_B_1269 100% 46% 0.031 0.9970.96 1.14 1 500100%1
2J8T_NAP_A_1316 100% 49% 0.033 0.9960.97 1.01 3 210100%1
3LQL_NAP_A_500 100% 43% 0.035 0.9961.13 1.07 3 410100%1