IM5: 2-amino-7-{[(3R,4R)-3-hydroxy-4-(hydroxymethyl)pyrrolidin-1-yl]methyl}-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one
IM5 is a Ligand Of Interest in 3PHC designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3PHC_IM5_B_501 | 71% | 30% | 0.1 | 0.922 | 0.77 | 1.91 | - | 5 | 1 | 0 | 100% | 1 |
| 3PHC_IM5_E_501 | 70% | 27% | 0.115 | 0.934 | 0.82 | 1.98 | - | 5 | 0 | 0 | 100% | 1 |
| 3PHC_IM5_A_501 | 69% | 28% | 0.105 | 0.919 | 0.83 | 1.94 | - | 3 | 0 | 0 | 100% | 1 |
| 3PHC_IM5_F_501 | 68% | 31% | 0.115 | 0.927 | 0.81 | 1.81 | - | 4 | 0 | 0 | 100% | 1 |
| 3PHC_IM5_D_501 | 67% | 24% | 0.121 | 0.932 | 0.92 | 2.08 | 1 | 3 | 0 | 0 | 100% | 1 |
| 3PHC_IM5_C_501 | 67% | 26% | 0.115 | 0.924 | 0.88 | 1.98 | - | 4 | 0 | 0 | 100% | 1 |
| 6AQS_IM5_A_302 | 37% | 26% | 0.125 | 0.82 | 0.87 | 1.97 | - | 4 | 1 | 0 | 100% | 1 |
| 4EB8_IM5_B_302 | 98% | 7% | 0.044 | 0.975 | 2.37 | 2.38 | 6 | 5 | 1 | 0 | 100% | 1 |
| 4EAR_IM5_C_301 | 97% | 9% | 0.052 | 0.973 | 2.02 | 2.36 | 5 | 8 | 0 | 0 | 100% | 1 |
| 5ETJ_IM5_A_301 | 93% | 30% | 0.077 | 0.978 | 1.07 | 1.62 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5UGF_IM5_C_305 | 85% | 41% | 0.099 | 0.972 | 0.85 | 1.31 | - | 1 | 0 | 0 | 100% | 1 |
| 3PHB_IM5_Q_290 | 83% | 33% | 0.104 | 0.968 | 1.15 | 1.41 | 2 | 2 | 0 | 0 | 100% | 1 |
