3SWD | pdb_00003swd


EPZ: (2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoic acid

EPZ is a Ligand Of Interest in 3SWD designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3SWD_EPZ_K_501 92% 19% 0.062 0.9591.64 1.72 11 750100%1
3SWD_EPZ_H_501 92% 24% 0.064 0.961.41 1.61 6 1000100%1
3SWD_EPZ_A_501 92% 23% 0.067 0.9631.44 1.61 9 800100%1
3SWD_EPZ_J_501 91% 24% 0.069 0.961.33 1.69 7 940100%1
3SWD_EPZ_G_501 90% 23% 0.068 0.9571.38 1.7 8 1120100%1
3SWD_EPZ_F_501 89% 18% 0.071 0.9561.74 1.67 10 1100100%1
3SWD_EPZ_C_501 89% 20% 0.075 0.961.58 1.71 9 920100%1
3SWD_EPZ_B_501 88% 22% 0.073 0.9551.4 1.7 7 930100%1
3SWD_EPZ_D_501 88% 21% 0.073 0.9551.46 1.71 10 1100100%1
3SWD_EPZ_E_501 87% 17% 0.074 0.9511.89 1.66 8 1300100%1
3SWD_EPZ_L_501 74% 20% 0.096 0.9281.58 1.67 6 1020100%1
3SWD_EPZ_I_501 62% 24% 0.103 0.8951.46 1.55 8 740100%1
7F3V_EPZ_C_301 99% 55% 0.04 0.9860.74 0.83 1 100100%1
6Q0A_EPZ_A_502 98% 60% 0.047 0.9810.57 0.8 - 100100%1
3SU9_EPZ_A_427 98% 25% 0.047 0.9761.33 1.64 7 920100%1
3SWG_EPZ_A_518 97% 19% 0.053 0.9771.8 1.56 9 1100100%1
6DNT_EPZ_A_402 96% 60% 0.057 0.9750.73 0.66 2 -10100%0.99