4D65


LDA: LAURYL DIMETHYLAMINE-N-OXIDE

LDA is a Ligand Of Interest in 4D65 designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4D65_LDA_C_1347Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4D65_LDA_C_1347Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4D65_LDA_C_1347 52% 14% 0.137 0.8950.96 2.89 2 330100%1
4D65_LDA_A_1346 49% 37% 0.169 0.9171.4 1.07 1 240100%1
4D65_LDA_A_1345 48% 48% 0.167 0.9091.1 0.91 1 100100%1
4D65_LDA_B_1346 44% 53% 0.144 0.8711.14 0.68 1 -00100%1
4D65_LDA_A_1347 40% 52% 0.157 0.8681.11 0.77 1 -10100%1
4D65_LDA_B_1500 39% 52% 0.196 0.9021.29 0.58 1 -10100%1
4D65_LDA_A_1367 34% 50% 0.171 0.8530.94 0.98 1 -40100%1
4D65_LDA_F_1346 34% 50% 0.179 0.8611.24 0.71 1 -40100%1
4D65_LDA_A_1374 34% 77% 0.164 0.9360.32 0.58 - -4050%1
4D65_LDA_A_1378 32% 77% 0.175 0.9270.34 0.56 - -0056%1
4D65_LDA_B_1353 30% 46% 0.201 0.8631.23 0.87 1 120100%1
4D65_LDA_B_1357 27% 78% 0.153 0.8790.33 0.55 - -0056%1
4D65_LDA_C_1358 25% 78% 0.203 0.9050.33 0.56 - -1063%1
4D65_LDA_B_1351 25% 44% 0.183 0.8161.18 1 1 120100%1
4D65_LDA_B_1347 24% 51% 0.208 0.8341.14 0.77 1 -20100%1
4D65_LDA_C_1346 22% 53% 0.233 0.8481.2 0.65 1 -10100%1
4D65_LDA_A_1371 21% 55% 0.239 0.8511.22 0.54 1 -10100%1
4D65_LDA_C_1345 21% 43% 0.223 0.8331.4 0.84 1 -10100%1
4D65_LDA_B_1501 21% 54% 0.211 0.8181.16 0.63 1 -30100%1
4D65_LDA_A_1354 21% 46% 0.23 0.8371.2 0.91 1 -90100%1
4D65_LDA_A_1344 20% 46% 0.233 0.8391.35 0.75 1 -00100%1
4D65_LDA_B_1348 19% 39% 0.251 0.851.33 1.05 1 130100%1
4D65_LDA_A_1376 18% 53% 0.267 0.8531.25 0.59 2 -20100%1
4D65_LDA_B_1352 18% 44% 0.212 0.7961.28 0.91 1 -00100%1
4D65_LDA_D_1361 18% 78% 0.251 0.9270.28 0.61 - -0050%1
4D65_LDA_B_1359 17% 53% 0.227 0.8071.24 0.6 1 -20100%1
4D65_LDA_A_1372 17% 51% 0.253 0.8331.25 0.65 1 -20100%1
4D65_LDA_A_1348 17% 60% 0.226 0.8051.1 0.44 1 -30100%1
4D65_LDA_F_1347 17% 54% 0.237 0.8131.15 0.63 1 -30100%1
4D65_LDA_B_1350 16% 46% 0.202 0.7691.31 0.81 2 -10100%1
4D65_LDA_C_1356 15% 52% 0.294 0.861.31 0.57 1 -00100%1
4D65_LDA_A_1370 15% 41% 0.22 0.7811.24 1.08 1 120100%1
4D65_LDA_A_1358 14% 27% 0.234 0.7832.5 0.5 2 -30100%1
4D65_LDA_A_1368 14% 41% 0.221 0.7671.05 1.26 2 250100%1
4D65_LDA_A_1359 13% 80% 0.271 0.9010.31 0.53 - -1050%1
4D65_LDA_B_1354 12% 53% 0.282 0.8161.2 0.64 1 -20100%1
4D65_LDA_F_1500 12% 45% 0.237 0.8091.49 0.65 2 -2075%1
4D65_LDA_F_1350 11% 51% 0.272 0.7911.2 0.72 2 -10100%1
4D65_LDA_A_1500 11% 73% 0.249 0.8210.41 0.64 - -0069%1
4D65_LDA_F_1348 10% 53% 0.224 0.7331.05 0.76 1 -30100%1
4D65_LDA_A_1357 10% 54% 0.258 0.7681.22 0.57 2 -70100%1
4D65_LDA_A_1379 10% 52% 0.237 0.7451.24 0.63 1 -50100%1
4D65_LDA_F_1345 10% 52% 0.264 0.7691.2 0.67 1 -10100%1
4D65_LDA_A_1365 10% 52% 0.354 0.8551.26 0.6 2 -10100%1
4D65_LDA_D_1352 9% 52% 0.303 0.8011.11 0.77 1 -40100%1
4D65_LDA_C_1355 9% 38% 0.301 0.8771.32 1.11 1 13056%1
4D65_LDA_A_1373 9% 27% 0.269 0.7642.49 0.51 2 -30100%1
4D65_LDA_E_1352 9% 42% 0.32 0.8151.35 0.92 2 -10100%1
4D65_LDA_F_1354 9% 57% 0.3 0.7921.05 0.6 1 -10100%1
4D65_LDA_F_1349 9% 50% 0.26 0.751.15 0.8 1 120100%1
4D65_LDA_E_1344 9% 49% 0.28 0.7671.13 0.84 1 -40100%1
4D65_LDA_B_1360 9% 53% 0.249 0.7351.12 0.7 2 -20100%1
4D65_LDA_B_1355 8% 54% 0.281 0.7641.25 0.53 1 -10100%1
4D65_LDA_B_1349 8% 50% 0.243 0.7581.47 0.49 1 -1081%1
4D65_LDA_C_1353 8% 58% 0.26 0.7361.15 0.5 1 -20100%1
4D65_LDA_A_1385 8% 54% 0.291 0.7611.14 0.67 1 -40100%1
4D65_LDA_F_1504 7% 7% 0.292 0.7570.98 3.78 1 750100%1
4D65_LDA_A_1360 7% 28% 0.369 0.8821.35 1.52 1 20075%1
4D65_LDA_E_1355 7% 52% 0.271 0.7351.17 0.72 2 -10100%1
4D65_LDA_C_1351 7% 55% 0.34 0.8051.18 0.58 1 -30100%1
4D65_LDA_B_1344 7% 50% 0.291 0.821.52 0.46 1 -1063%1
4D65_LDA_E_1348 7% 48% 0.325 0.7731.21 0.8 1 -10100%1
4D65_LDA_B_1345 7% 54% 0.371 0.821.27 0.54 1 -40100%1
4D65_LDA_A_1369 6% 53% 0.241 0.6771.26 0.59 1 -20100%1
4D65_LDA_B_1364 6% 55% 0.268 0.7041.25 0.5 1 -00100%1
4D65_LDA_A_1353 6% 52% 0.352 0.8431.46 0.44 2 -1069%1
4D65_LDA_B_1358 6% 53% 0.283 0.7531.41 0.42 1 -0075%1
4D65_LDA_C_1352 5% 55% 0.272 0.7451.38 0.37 1 -6069%1
4D65_LDA_C_1501 5% 41% 0.285 0.741.34 0.96 1 16069%1
4D65_LDA_A_1366 5% 50% 0.343 0.7411.09 0.86 1 -30100%1
4D65_LDA_B_1370 5% 48% 0.3 0.7871.72 0.32 1 -0050%1
4D65_LDA_A_1382 4% 50% 0.354 0.7481.23 0.71 1 -20100%1
4D65_LDA_B_1356 4% 59% 0.381 0.7711.15 0.46 1 -10100%1
4D65_LDA_A_1355 4% 51% 0.327 0.7120.92 0.99 1 150100%1
4D65_LDA_D_1347 4% 37% 0.309 0.6931.24 1.23 1 210100%1
4D65_LDA_C_1502 4% 78% 0.234 0.7060.36 0.54 - -0050%1
4D65_LDA_A_1386 4% 50% 0.291 0.6711.26 0.7 2 -40100%1
4D65_LDA_A_1364 4% 78% 0.33 0.790.34 0.54 - -0056%1
4D65_LDA_E_1347 4% 35% 0.35 0.7781.15 1.42 1 14069%1
4D65_LDA_A_1356 4% 51% 0.4 0.8221.55 0.37 1 -1069%1
4D65_LDA_E_1349 4% 55% 0.439 0.8281.15 0.62 1 -2088%1
4D65_LDA_D_1344 4% 45% 0.392 0.7531.29 0.84 1 -30100%1
4D65_LDA_B_1362 3% 79% 0.352 0.790.39 0.47 - -1056%1
4D65_LDA_D_1350 3% 51% 0.352 0.7611.51 0.43 2 -1069%1
4D65_LDA_A_1350 3% 56% 0.353 0.7041.24 0.49 1 -00100%1
4D65_LDA_A_1387 3% 35% 0.316 0.6661.12 1.43 1 290100%1
4D65_LDA_D_1348 3% 47% 0.39 0.741.2 0.87 1 -10100%1
4D65_LDA_C_1361 3% 54% 0.442 0.7931.24 0.57 1 -20100%1
4D65_LDA_E_1350 3% 57% 0.389 0.7291.13 0.53 1 -00100%1
4D65_LDA_C_1357 3% 41% 0.341 0.6711.25 1.05 1 -10100%1
4D65_LDA_B_1367 3% 51% 0.503 0.8371.17 0.73 1 -20100%1
4D65_LDA_D_1360 3% 44% 0.452 0.7781.08 1.08 1 120100%1
4D65_LDA_F_1351 3% 36% 0.431 0.7521.47 1.08 1 160100%1
4D65_LDA_B_1369 3% 50% 0.464 0.7850.88 1.03 1 120100%1
4D65_LDA_A_1361 3% 46% 0.416 0.7341.19 0.89 1 100100%1
4D65_LDA_C_1362 3% 51% 0.404 0.721.19 0.71 1 -00100%1
4D65_LDA_B_1374 3% 45% 0.296 0.6061.09 1.03 2 130100%1
4D65_LDA_A_1363 2% 77% 0.435 0.8260.41 0.52 - -0056%1
4D65_LDA_F_1502 2% 74% 0.323 0.6920.33 0.67 - -1063%1
4D65_LDA_C_1360 2% 43% 0.467 0.771.33 0.91 1 -40100%1
4D65_LDA_B_1365 2% 54% 0.428 0.7261.15 0.65 1 -20100%1
4D65_LDA_A_1383 2% 53% 0.488 0.7811.2 0.65 1 -50100%1
4D65_LDA_D_1363 2% 44% 0.36 0.6461.09 1.07 1 200100%1
4D65_LDA_A_1375 2% 78% 0.394 0.760.39 0.49 - -3056%1
4D65_LDA_D_1345 2% 54% 0.404 0.6911.2 0.58 1 -20100%1
4D65_LDA_B_1373 2% 56% 0.332 0.6121.11 0.61 1 -70100%1
4D65_LDA_B_1366 2% 28% 0.396 0.6761.25 1.65 1 450100%1
4D65_LDA_F_1353 2% 59% 0.392 0.6691.08 0.52 1 -10100%1
4D65_LDA_E_1356 2% 57% 0.419 0.6861.08 0.6 1 -30100%1
4D65_LDA_A_1377 2% 56% 0.385 0.6481.15 0.55 1 -10100%1
4D65_LDA_B_1371 2% 37% 0.448 0.7091.01 1.43 2 380100%1
4D65_LDA_D_1353 2% 43% 0.438 0.6951.17 1.03 2 210100%1
4D65_LDA_A_1501 2% 45% 0.357 0.6661.63 0.52 1 -0069%1
4D65_LDA_C_1348 2% 51% 0.4 0.6961.44 0.47 2 -0069%1
4D65_LDA_F_1366 2% 51% 0.401 0.6411.03 0.86 1 -50100%1
4D65_LDA_B_1363 1% 52% 0.435 0.671.21 0.68 1 -30100%1
4D65_LDA_E_1353 1% 66% 0.352 0.6510.37 0.93 - -0063%1
4D65_LDA_A_1352 1% 54% 0.498 0.7691.37 0.42 1 -0075%1
4D65_LDA_A_1380 1% 53% 0.346 0.6181.48 0.38 1 -3069%1
4D65_LDA_F_1501 1% 53% 0.377 0.5891.14 0.71 1 -20100%1
4D65_LDA_D_1346 1% 57% 0.419 0.6091.15 0.51 1 -60100%1
4D65_LDA_C_1359 1% 35% 0.423 0.6611.58 1 2 -1069%1
4D65_LDA_B_1361 1% 77% 0.395 0.6440.38 0.53 - -1056%1
4D65_LDA_F_1503 1% 59% 0.428 0.5881.06 0.51 1 -00100%1
4D65_LDA_D_1355 1% 56% 0.431 0.5891.08 0.61 1 -30100%1
4D65_LDA_F_1355 1% 56% 0.448 0.6631.39 0.34 1 -3069%1
4D65_LDA_C_1354 1% 43% 0.428 0.6431.19 1.02 1 12069%1
4D65_LDA_A_1349 1% 54% 0.381 0.529 1.11 0.7 1 -20100%1
4D65_LDA_D_1354 1% 41% 0.497 0.6711.04 1.25 1 25088%1
4D65_LDA_D_1359 1% 79% 0.465 0.7060.38 0.49 - -0050%1
4D65_LDA_F_1357 1% 47% 0.509 0.6551.25 0.8 1 -20100%1
4D65_LDA_B_1368 1% 51% 0.537 0.7291.45 0.47 1 -1069%1
4D65_LDA_D_1362 1% 43% 0.397 0.526 0.86 1.35 1 140100%1
4D65_LDA_A_1388 1% 41% 0.405 0.516 1.21 1.11 2 160100%1
4D65_LDA_C_1350 1% 53% 0.554 0.6551.24 0.61 1 -00100%1
4D65_LDA_F_1361 1% 54% 0.4 0.49 1.17 0.63 2 -00100%1
4D65_LDA_B_1372 1% 42% 0.507 0.5910.78 1.44 - 160100%1
4D65_LDA_D_1356 1% 58% 0.582 0.6651.16 0.46 1 -50100%1
4D65_LDA_F_1352 1% 46% 0.506 0.5811.25 0.86 1 -60100%1
4D65_LDA_E_1351 0% 53% 0.43 0.549 1.47 0.37 2 -0069%1
4D65_LDA_A_1384 0% 54% 0.531 0.5911.16 0.63 1 -30100%1
4D65_LDA_D_1357 0% 51% 0.616 0.6751.23 0.67 1 -50100%1
4D65_LDA_D_1351 0% 51% 0.606 0.7151.5 0.42 2 -0069%1
4D65_LDA_F_1359 0% 46% 0.488 0.526 1.12 0.97 1 140100%1
4D65_LDA_F_1365 0% 49% 0.454 0.487 1.08 0.91 1 170100%1
4D65_LDA_A_1362 0% 47% 0.479 0.515 1.32 0.73 2 -10100%1
4D65_LDA_A_1381 0% 56% 0.485 0.502 1.18 0.53 1 -00100%1
4D65_LDA_E_1357 0% 47% 0.606 0.621.19 0.86 2 -30100%1
4D65_LDA_F_1358 0% 49% 0.534 0.547 1.14 0.82 1 -60100%1
4D65_LDA_F_1344 0% 49% 0.469 0.474 1.04 0.95 1 -70100%1
4D65_LDA_F_1356 0% 53% 0.577 0.6421.47 0.4 1 -1069%1
4D65_LDA_E_1354 0% 53% 0.417 0.421 1.2 0.63 1 -20100%1
4D65_LDA_A_1351 0% 51% 0.656 0.6870.85 1.03 - 13088%1
4D65_LDA_C_1500 0% 54% 0.542 0.524 1.15 0.63 1 -20100%1
4D65_LDA_F_1364 0% 48% 0.61 0.5881.16 0.87 1 -20100%1
4D65_LDA_E_1345 0% 49% 0.59 0.611.46 0.55 1 -1069%1
4D65_LDA_C_1349 0% 45% 0.652 0.6891.88 0.29 1 -0050%1
4D65_LDA_F_1360 0% 58% 0.528 0.467 1.14 0.5 2 -30100%1
4D65_LDA_A_1502 0% 56% 0.588 0.57 1.36 0.36 1 -3069%1
4D65_LDA_C_1344 0% 54% 0.543 0.469 1.26 0.54 1 -10100%1
4D65_LDA_E_1346 0% 51% 0.543 0.525 1.34 0.58 1 -2069%1
4D65_LDA_F_1363 0% 49% 0.563 0.44 1.11 0.85 2 -10100%1
4D65_LDA_D_1358 0% 80% 0.753 0.7120.39 0.44 - -0050%1
4D65_LDA_F_1362 0% 48% 0.619 0.263 1.15 0.86 1 -70100%1
4D65_LDA_D_1349 0% 53% 0.705 0.36 1.21 0.61 1 -00100%1
2VQI_LDA_B_1639 100% 35% 0.04 0.9952.08 0.52 1 -30100%1
6PRC_LDA_H_701 97% 23% 0.047 0.9592.52 0.69 2 -00100%1
3PRC_LDA_H_701 95% 24% 0.049 0.9542.42 0.76 2 -00100%1
2PRC_LDA_M_701 95% 25% 0.048 0.952.43 0.69 2 -00100%1
5PRC_LDA_H_701 95% 20% 0.052 0.9542.65 0.78 2 100100%1