NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NDP is a Ligand Of Interest in 4DBV designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4DBV_NDP_O_336 | 97% | 32% | 0.07 | 0.985 | 1.56 | 1.16 | 7 | 5 | 4 | 0 | 100% | 1 |
4DBV_NDP_P_336 | 97% | 28% | 0.071 | 0.984 | 1.62 | 1.29 | 8 | 5 | 0 | 0 | 100% | 1 |
4DBV_NDP_Q_336 | 93% | 28% | 0.084 | 0.979 | 1.6 | 1.29 | 8 | 6 | 0 | 0 | 100% | 1 |
4DBV_NDP_R_336 | 91% | 25% | 0.087 | 0.973 | 1.62 | 1.44 | 9 | 7 | 1 | 0 | 100% | 1 |
2DBV_NDP_P_336 | 94% | 24% | 0.078 | 0.975 | 1.56 | 1.56 | 7 | 8 | 3 | 0 | 100% | 1 |
1US0_NDP_A_318 | 100% | 45% | 0.027 | 0.998 | 1.21 | 0.91 | 3 | - | 4 | 0 | 100% | 1 |
2I16_NDP_A_319 | 100% | 46% | 0.028 | 0.998 | 1.2 | 0.9 | 3 | 1 | 0 | 0 | 100% | 1 |
2I17_NDP_A_319 | 100% | 46% | 0.029 | 0.998 | 1.22 | 0.89 | 3 | - | 0 | 0 | 100% | 1 |
2PF8_NDP_A_318 | 100% | 46% | 0.031 | 0.998 | 1.17 | 0.93 | 3 | - | 4 | 0 | 100% | 1 |
2PFH_NDP_A_318 | 100% | 26% | 0.03 | 0.998 | 1.79 | 1.2 | 8 | 7 | 4 | 0 | 100% | 1 |