GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4G5S designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4G5S_GDP_C_401 | 60% | 48% | 0.179 | 0.967 | 0.94 | 1.08 | 1 | 1 | 2 | 0 | 100% | 1 |
| 4G5S_GDP_B_401 | 60% | 47% | 0.194 | 0.98 | 0.95 | 1.08 | 1 | 1 | 6 | 0 | 100% | 1 |
| 4G5S_GDP_A_401 | 48% | 48% | 0.232 | 0.976 | 0.93 | 1.09 | 1 | 2 | 4 | 0 | 100% | 1 |
| 2ODE_GDP_C_1002 | 97% | 45% | 0.064 | 0.979 | 1.12 | 0.99 | 2 | 2 | 0 | 0 | 100% | 1 |
| 2IHB_GDP_A_356 | 93% | 49% | 0.092 | 0.988 | 0.88 | 1.1 | 1 | 4 | 0 | 0 | 100% | 1 |
| 4G5O_GDP_C_401 | 79% | 44% | 0.141 | 0.989 | 0.98 | 1.18 | 2 | 2 | 1 | 0 | 100% | 1 |
| 2V4Z_GDP_A_1348 | 66% | 47% | 0.18 | 0.987 | 0.93 | 1.11 | 1 | 4 | 0 | 0 | 100% | 1 |
| 4G5R_GDP_A_401 | 55% | 43% | 0.204 | 0.973 | 0.89 | 1.31 | 1 | 4 | 2 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 5KY2_GDP_A_403 | 100% | 48% | 0.036 | 0.989 | 0.98 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
