MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
MGD is a Ligand Of Interest in 4YDD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4YDD_MGD_A_1003 | 95% | 2% | 0.058 | 0.971 | 4.44 | 2.33 | 28 | 14 | 0 | 0 | 100% | 1 |
| 4YDD_MGD_C_1003 | 90% | 2% | 0.071 | 0.961 | 4.64 | 2.43 | 28 | 19 | 1 | 0 | 100% | 1 |
| 4YDD_MGD_E_1003 | 86% | 2% | 0.079 | 0.951 | 4.63 | 2.27 | 27 | 19 | 1 | 0 | 100% | 1 |
| 5E7O_MGD_G_1003 | 100% | 1% | 0.021 | 0.997 | 5.18 | 1.97 | 30 | 19 | 3 | 0 | 100% | 1 |
| 5CH7_MGD_A_1003 | 98% | 1% | 0.051 | 0.98 | 5.1 | 3.29 | 23 | 24 | 2 | 0 | 100% | 1 |
| 5CHC_MGD_A_1003 | 96% | 1% | 0.059 | 0.976 | 5.24 | 3.09 | 25 | 24 | 1 | 0 | 100% | 1 |
| 8CM5_MGD_A_1104 | 100% | 45% | 0.022 | 0.996 | 0.75 | 1.26 | 1 | 5 | 3 | 0 | 100% | 1 |
| 8R3A_MGD_A_912 | 100% | 43% | 0.026 | 0.994 | 0.92 | 1.18 | 2 | 4 | 2 | 0 | 100% | 1 |
| 3ML1_MGD_A_1804 | 100% | 21% | 0.027 | 0.994 | 1.34 | 1.86 | 8 | 17 | 2 | 0 | 100% | 1 |
| 7Z5O_MGD_AAA_1101 | 100% | 55% | 0.027 | 0.994 | 0.64 | 0.96 | - | 3 | 1 | 0 | 100% | 1 |
| 3O5A_MGD_A_1804 | 100% | 17% | 0.027 | 0.993 | 1.31 | 2.19 | 4 | 17 | 2 | 0 | 100% | 1 |
