PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 5E25 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5E25_PLP_C_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5E25_PLP_C_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5E25_PLP_C_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5E25_PLP_C_301 97% 4% 0.073 0.9864.03 1.86 4 700100%1
5E25_PLP_B_301 96% 4% 0.08 0.993.59 2.14 3 610100%1
5E25_PLP_A_301 94% 4% 0.089 0.9883.5 2.11 3 700100%1
5CM0_PLP_B_301 96% 6% 0.078 0.9882.36 2.66 5 810100%1
1EKV_PLP_A_370 100% 19% 0.019 0.9982 1.45 5 41094%1
2BIE_PLP_B_1361 100% 28% 0.039 0.9891.48 1.39 4 310100%1
4NOG_PLP_A_501 100% 38% 0.042 0.9921.24 1.18 3 100100%1
3WQC_PLP_B_402 100% 21% 0.045 0.9931.96 1.38 4 400100%1
4HT3_PLP_B_401 100% 15% 0.045 0.9932.04 1.72 3 500100%1