UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 5EKE designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5EKE_UDP_A_401 | 71% | 32% | 0.088 | 0.909 | 0.99 | 1.6 | - | 6 | 1 | 0 | 100% | 1 |
| 5EKE_UDP_D_401 | 69% | 32% | 0.105 | 0.921 | 1 | 1.6 | - | 6 | 3 | 0 | 100% | 1 |
| 5EKE_UDP_C_401 | 63% | 31% | 0.092 | 0.886 | 1 | 1.61 | - | 5 | 2 | 0 | 100% | 1 |
| 5EKE_UDP_B_401 | 55% | 32% | 0.11 | 0.875 | 0.99 | 1.61 | - | 6 | 0 | 0 | 100% | 1 |
| 5EKP_UDP_C_401 | 76% | 31% | 0.074 | 0.91 | 1 | 1.64 | - | 6 | 0 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |
