Ligand validation:5GTD

AMP: ADENOSINE MONOPHOSPHATE

AMP is a Ligand Of Interest in 5GTD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5GTD_AMP_B_504	66%	5%	0.13	0.944	2.93	2.38	10	4	0	0	96%	0.9565
5GTD_AMP_A_505	40%	5%	0.218	0.937	2.93	2.4	10	4	1	0	96%	0.9565
5BUS_AMP_A_503	84%	26%	0.121	0.982	1.49	1.49	4	5	0	0	100%	1
5X8F_AMP_C_502	3%	43%	0.347	0.665	0.85	1.35	1	5	2	0	100%	0.62
3LOQ_AMP_A_271	100%	45%	0.039	0.987	0.82	1.3	-	2	2	0	100%	1
7SNB_AMP_A_303	100%	55%	0.045	0.993	0.75	0.98	-	1	0	0	100%	0.783
4RDH_AMP_C_301	100%	23%	0.039	0.983	1.37	1.79	3	6	0	0	100%	1
3CLT_AMP_C_1262	100%	40%	0.046	0.987	0.91	1.4	1	4	0	0	100%	1
5VEO_AMP_A_524	100%	40%	0.046	0.987	0.86	1.47	-	3	1	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.