NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NDP is a Ligand Of Interest in 5GUD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5GUD_NDP_E_503 | 98% | 16% | 0.059 | 0.977 | 2.05 | 1.63 | 13 | 5 | 0 | 0 | 100% | 1 |
5GUD_NDP_A_502 | 88% | 21% | 0.088 | 0.964 | 1.85 | 1.45 | 11 | 5 | 1 | 0 | 100% | 1 |
5GUD_NDP_F_502 | 78% | 21% | 0.096 | 0.938 | 1.9 | 1.44 | 11 | 5 | 2 | 0 | 100% | 1 |
5GUD_NDP_C_502 | 76% | 18% | 0.098 | 0.935 | 2.01 | 1.51 | 13 | 6 | 1 | 0 | 100% | 1 |
5GUD_NDP_B_502 | 67% | 19% | 0.119 | 0.927 | 2.12 | 1.33 | 14 | 2 | 3 | 0 | 100% | 1 |
5GUD_NDP_D_502 | 58% | 17% | 0.112 | 0.889 | 2.04 | 1.59 | 11 | 7 | 1 | 0 | 100% | 1 |
1US0_NDP_A_318 | 100% | 45% | 0.027 | 0.998 | 1.21 | 0.91 | 3 | - | 4 | 0 | 100% | 1 |
2I16_NDP_A_319 | 100% | 46% | 0.028 | 0.998 | 1.2 | 0.9 | 3 | 1 | 0 | 0 | 100% | 1 |
2I17_NDP_A_319 | 100% | 46% | 0.029 | 0.998 | 1.22 | 0.89 | 3 | - | 0 | 0 | 100% | 1 |
2PF8_NDP_A_318 | 100% | 46% | 0.031 | 0.998 | 1.17 | 0.93 | 3 | - | 4 | 0 | 100% | 1 |
2PFH_NDP_A_318 | 100% | 26% | 0.03 | 0.998 | 1.79 | 1.2 | 8 | 7 | 4 | 0 | 100% | 1 |