5IQG | pdb_00005iqg


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 5IQG designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5IQG_GDP_D_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5IQG_GDP_D_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5IQG_GDP_D_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5IQG_GDP_D_500 78% 49% 0.143 0.9871.04 0.94 3 210100%1
5IQG_GDP_C_500 73% 35% 0.147 0.9761.26 1.31 3 240100%1
5IQG_GDP_A_500 70% 29% 0.154 0.9711.67 1.17 2 2110100%1
5IQG_GDP_B_500 66% 26% 0.158 0.9651.85 1.19 6 210100%1
5IQF_GDP_A_500 89% 34% 0.106 0.9870.9 1.7 1 800100%1
4ORK_GDP_B_500 71% 42% 0.148 0.970.95 1.3 - 400100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
8QEG_GDP_A_401 100% 51% 0.031 0.9931.02 0.87 3 100100%1
8QEH_GDP_A_405 100% 55% 0.03 0.9930.89 0.85 1 100100%1
9BAJ_GDP_A_203 100% 41% 0.032 0.9941.22 1.1 2 210100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1