Ligand validation:5JDN

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
5JDN_MYS_A_409	13%	74%	0.174	0.84	0.37	0.53	-	-	0	33%	1
5JDN_MYS_A_410	8%	72%	0.136	0.744	0.46	0.48	-	-	0	33%	1
5JDN_MYS_A_406	5%	58%	0.265	0.696	0.34	1.11	-	2	0	100%	1
5JDN_MYS_A_407	1%	73%	0.402	0.729	0.38	0.54	-	-	0	40%	1
5JDN_MYS_A_408	1%	65%	0.477	0.704	0.34	0.84	-	-	1	80%	1
5HYA_MYS_A_413	42%	91%	0.144	0.9	0.12	0.36	-	-	1	80%	1
3V5U_MYS_A_714	30%	62%	0.156	0.858	0.41	0.88	-	-	3	80%	1
5HXH_MYS_B_407	29%	73%	0.117	0.897	0.42	0.51	-	-	0	33%	1
5JDG_MYS_A_423	25%	65%	0.154	0.927	0.44	0.73	-	-	0	27%	1
5HXE_MYS_A_410	23%	64%	0.183	0.81	0.37	0.83	-	-	0	100%	1
6GAD_MYS_A_308	71%	71%	0.088	0.908	0.09	0.85	-	-	0	100%	1
6GAE_MYS_A_308	68%	71%	0.089	0.9	0.09	0.85	-	-	0	100%	1
6GAC_MYS_A_308	67%	71%	0.089	0.896	0.09	0.85	-	-	0	100%	1
6GAG_MYS_A_308	67%	71%	0.091	0.897	0.09	0.85	-	-	0	100%	1
6GA9_MYS_A_308	66%	71%	0.094	0.898	0.09	0.85	-	-	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 5JDN | pdb_00005jdn