Ligand validation:5JMY

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5JMY designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5JMY_NAG_A_802	62%	72%	0.153	0.944	0.29	0.77	-	1	0	0	100%	0.9333
5JMY_NAG_A_801	48%	76%	0.173	0.916	0.31	0.63	-	-	0	0	100%	0.9333
5JMY_NAG_A_805	22%	77%	0.242	0.86	0.31	0.6	-	-	0	0	100%	0.9333
5JMY_NAG_B_805	17%	80%	0.241	0.823	0.34	0.5	-	-	0	0	100%	0.9333
5JMY_NAG_B_802	17%	73%	0.278	0.858	0.3	0.73	-	1	0	0	100%	0.9333
5JMY_NAG_B_801	10%	71%	0.291	0.8	0.32	0.78	-	1	0	0	100%	0.9333
6GID_NAG_A_801	76%	84%	0.095	0.929	0.3	0.45	-	-	0	0	100%	0.9333
6SUK_NAG_A_802	67%	87%	0.119	0.927	0.29	0.39	-	-	0	0	100%	0.9333
1R1I_NAG_A_752	65%	35%	0.066	0.867	0.71	1.8	-	3	0	0	100%	0.9333
1R1J_NAG_A_753	64%	65%	0.091	0.889	0.64	0.71	-	-	0	0	100%	0.9333
6XVP_NAG_A_806	63%	86%	0.127	0.923	0.24	0.47	-	-	0	0	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5F9W_NAG_A_510	100%	88%	0.023	0.994	0.24	0.43	-	-	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.