LDA: LAURYL DIMETHYLAMINE-N-OXIDE

LDA is a Ligand Of Interest in 5NXU designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5NXU_LDA_C_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5NXU_LDA_C_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5NXU_LDA_C_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5NXU_LDA_C_404 34% 11% 0.239 0.9231.1 3.03 1 310100%1
5NXU_LDA_B_401 27% 12% 0.282 0.9291.06 2.99 1 310100%1
5NXU_LDA_C_403 25% 65% 0.287 0.9250.78 0.57 1 -00100%1
5NXU_LDA_B_405 22% 12% 0.262 0.8881.11 2.96 1 31094%1
5NXU_LDA_B_402 16% 67% 0.337 0.9090.78 0.5 1 -10100%1
5NXU_LDA_B_404 13% 78% 0.321 0.930.42 0.46 - -0063%1
5NXU_LDA_C_407 8% 69% 0.365 0.8390.72 0.47 1 -00100%1
5NXU_LDA_C_401 7% 7% 0.398 0.8921.25 3.42 1 33081%1
5NXU_LDA_A_402 7% 68% 0.418 0.870.74 0.5 1 -00100%1
5NXU_LDA_B_408 5% 11% 0.513 0.9141.05 3.05 1 300100%1
5NXU_LDA_B_403 4% 65% 0.328 0.7690.94 0.41 1 -0069%1
5NXU_LDA_C_408 3% 69% 0.488 0.8310.73 0.46 1 -00100%1
5NXU_LDA_B_409 3% 67% 0.439 0.7770.74 0.55 1 -00100%1
5NXU_LDA_C_402 3% 69% 0.474 0.8130.76 0.46 1 -00100%1
5NXU_LDA_C_405 3% 6% 0.404 0.7861.53 3.49 1 30069%1
5NXU_LDA_C_406 2% 63% 0.452 0.710.86 0.55 1 -00100%1
5NXU_LDA_B_406 1% 6% 0.48 0.7711.35 3.68 1 30069%1
5NXU_LDA_B_407 0% 7% 0.593 0.7151.37 3.44 1 31069%1
5NXU_LDA_A_401 0% 68% 0.703 0.7310.78 0.47 1 -00100%1
5NXR_LDA_B_413 48% 59% 0.164 0.9050.89 0.7 1 -10100%1
2VQI_LDA_B_1639 100% 35% 0.04 0.9952.08 0.52 1 -30100%1
6PRC_LDA_H_701 97% 23% 0.047 0.9592.52 0.69 2 -00100%1
3PRC_LDA_H_701 95% 24% 0.049 0.9542.42 0.76 2 -00100%1
2PRC_LDA_M_701 95% 25% 0.048 0.952.43 0.69 2 -00100%1
5PRC_LDA_H_701 95% 20% 0.052 0.9542.65 0.78 2 100100%1