XYP: beta-D-xylopyranose

XYP is a Ligand Of Interest in 5UU8 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5UU8_XYP_A_407 14% 30% 0.254 0.8041.95 0.85 3 100100%0.79
5UU8_XYP_A_408 11% 32% 0.291 0.8051.93 0.8 3 100100%0.79
5UU8_XYP_A_409 9% 29% 0.277 0.7732 0.88 3 100100%0.8
5UU8_XYP_A_411 8% 30% 0.28 0.7491.92 0.89 3 -00100%0.51
5UU8_XYP_A_410 2% 32% 0.44 0.7121.95 0.79 3 -00100%0.72
5UUB_XYP_A_419 71% 22% 0.093 0.9132.11 1.14 2 -00100%0.837
6N4W_XYP_A_414 69% 36% 0.118 0.9331.76 0.79 3 -00100%0.781
5UN3_XYP_A_355 63% 28% 0.108 0.9011.98 0.94 2 110100%0.876
6N4Z_XYP_A_413 60% 40% 0.127 0.9131.81 0.55 3 -00100%0.776
5UUA_XYP_A_416 59% 36% 0.125 0.9061.54 0.98 1 100100%0.86
1OD8_XYP_A_1311 100% 64% 0.047 0.9920.75 0.64 - -00100%1
1V0M_XYP_A_1304 100% 71% 0.035 0.9930.82 0.33 - -0090%0.9
8Y00_XYP_D_201 99% 28% 0.032 0.9860.63 2.19 - 71090%0.9
2WYS_XYP_A_1001 99% 38% 0.052 0.9830.69 1.7 - 430100%1
1V0N_XYP_A_1306 98% 60% 0.048 0.9890.76 0.78 - -0090%0.9