XYP: beta-D-xylopyranose
XYP is a Ligand Of Interest in 5UUA designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5UUA_XYP_A_416 | 54% | 41% | 0.101 | 0.904 | 1.4 | 0.82 | 1 | - | 0 | 0 | 100% | 0.86 |
| 5UUA_XYP_A_420 | 42% | 41% | 0.12 | 0.876 | 1.53 | 0.7 | 2 | - | 0 | 0 | 100% | 0.72 |
| 5UUA_XYP_A_421 | 36% | 35% | 0.127 | 0.859 | 1.46 | 1.08 | 1 | - | 1 | 0 | 100% | 0.75 |
| 5UUA_XYP_A_419 | 19% | 16% | 0.164 | 0.823 | 2.16 | 1.46 | 3 | 3 | 0 | 0 | 100% | 0.73 |
| 5UUA_XYP_A_415 | 18% | 22% | 0.161 | 0.81 | 1.96 | 1.31 | 2 | 1 | 0 | 0 | 100% | 0.9 |
| 5UUA_XYP_A_418 | 10% | 33% | 0.2 | 0.801 | 1.61 | 1.06 | 2 | 2 | 1 | 0 | 100% | 0.84 |
| 5UUA_XYP_A_422 | 4% | 29% | 0.23 | 0.727 | 1.73 | 1.13 | 2 | 1 | 0 | 0 | 100% | 0.72 |
| 5UUA_XYP_A_417 | 1% | 25% | 0.276 | 0.679 | 1.71 | 1.4 | 2 | 2 | 0 | 0 | 100% | 0.81 |
| 6N4W_XYP_A_414 | 64% | 41% | 0.092 | 0.938 | 1.57 | 0.68 | 3 | - | 0 | 0 | 100% | 0.78 |
| 5UUB_XYP_A_419 | 58% | 29% | 0.098 | 0.919 | 1.87 | 1 | 2 | - | 0 | 0 | 100% | 0.84 |
| 6N4Z_XYP_A_413 | 54% | 45% | 0.109 | 0.92 | 1.6 | 0.46 | 3 | - | 0 | 0 | 100% | 0.78 |
| 5UU9_XYP_A_409 | 46% | 43% | 0.116 | 0.89 | 1.42 | 0.73 | 1 | - | 1 | 0 | 100% | 0.8 |
| 5UN3_XYP_A_355 | 38% | 38% | 0.131 | 0.874 | 1.76 | 0.67 | 2 | - | 1 | 0 | 100% | 0.88 |
| 4PMY_XYP_A_401 | 100% | 73% | 0.017 | 0.996 | 0.47 | 0.45 | - | - | 0 | 0 | 100% | 1 |
| 1OD8_XYP_A_1311 | 99% | 63% | 0.027 | 0.992 | 0.69 | 0.55 | - | - | 0 | 0 | 100% | 1 |
| 3FYU_XYP_C_1001 | 98% | 48% | 0.033 | 0.993 | 1.11 | 0.8 | - | - | 0 | 0 | 100% | 1 |
| 1W9T_XYP_B_1148 | 98% | 21% | 0.022 | 0.994 | 1.19 | 2.06 | 1 | 5 | 6 | 0 | 90% | 1 |
| 1V0M_XYP_A_1304 | 97% | 66% | 0.024 | 0.993 | 0.83 | 0.3 | - | - | 0 | 0 | 90% | 1 |














