NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5VTX designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5VTX_NAG_A_402 | 33% | 45% | 0.235 | 0.917 | 0.68 | 1.43 | - | 2 | 0 | 0 | 100% | 0.9333 |
5VTX_NAG_E_501 | 22% | 55% | 0.27 | 0.888 | 0.52 | 1.18 | - | 1 | 0 | 0 | 100% | 0.9333 |
5VTX_NAG_A_401 | 22% | 52% | 0.228 | 0.844 | 0.5 | 1.33 | - | 1 | 0 | 0 | 100% | 0.9333 |
5VTX_NAG_C_501 | 15% | 28% | 0.266 | 0.828 | 0.72 | 2.12 | - | 4 | 0 | 0 | 100% | 0.9333 |
5VTX_NAG_C_502 | 4% | 55% | 0.329 | 0.694 | 0.53 | 1.18 | - | 2 | 0 | 0 | 100% | 0.9333 |
5VTX_NAG_F_201 | 2% | 28% | 0.418 | 0.71 | 0.67 | 2.18 | - | 5 | 0 | 0 | 100% | 0.9333 |
5VTX_NAG_D_201 | 1% | 70% | 0.433 | 0.616 | 0.41 | 0.73 | - | - | 0 | 0 | 100% | 0.9333 |
3HMG_NAG_A_334 | 81% | 39% | 0.002 | 0.851 | 0.94 | 1.45 | - | 3 | 0 | 0 | 100% | 0.9333 |
4HMG_NAG_E_334 | 81% | 47% | 0.074 | 0.924 | 0.7 | 1.34 | - | 1 | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_F_201 | 76% | 87% | 0.08 | 0.916 | 0.2 | 0.49 | - | - | 0 | 0 | 100% | 0.9333 |
2HMG_NAG_C_348 | 76% | 52% | 0.088 | 0.924 | 0.62 | 1.22 | - | 2 | 0 | 0 | 100% | 0.9333 |
1HGD_NAG_E_334 | 72% | 49% | 0.085 | 0.908 | 0.8 | 1.17 | - | 2 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
5O59_NAG_A_601 | 100% | 70% | 0.024 | 0.993 | 0.3 | 0.85 | - | - | 0 | 0 | 100% | 0.9333 |