DUP: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE
DUP is a Ligand Of Interest in 6HDE designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6HDE_DUP_A_201 | 95% | 22% | 0.074 | 0.976 | 1.67 | 1.57 | 5 | 6 | 0 | 0 | 100% | 1 |
6HDE_DUP_A_202 | 85% | 22% | 0.109 | 0.973 | 1.65 | 1.57 | 4 | 5 | 2 | 0 | 100% | 1 |
6HDE_DUP_B_201 | 83% | 21% | 0.108 | 0.968 | 1.87 | 1.47 | 5 | 4 | 2 | 0 | 100% | 1 |
1RN8_DUP_A_777 | 99% | 27% | 0.048 | 0.986 | 1.56 | 1.39 | 5 | 2 | 1 | 0 | 100% | 1 |
1RNJ_DUP_A_777 | 96% | 24% | 0.063 | 0.973 | 1.64 | 1.47 | 3 | 4 | 0 | 0 | 100% | 1 |
3LOJ_DUP_A_201 | 100% | 17% | 0.029 | 0.995 | 2.23 | 1.42 | 9 | 4 | 2 | 0 | 100% | 1 |
3HZA_DUP_A_201 | 100% | 20% | 0.036 | 0.995 | 2.01 | 1.4 | 6 | 8 | 1 | 0 | 100% | 1 |
5ECT_DUP_A_201 | 100% | 24% | 0.04 | 0.994 | 1.82 | 1.3 | 7 | 4 | 1 | 0 | 100% | 1 |
3EHW_DUP_Y_777 | 100% | 23% | 0.039 | 0.991 | 1.74 | 1.47 | 6 | 4 | 4 | 0 | 100% | 1 |
1SIX_DUP_A_170 | 100% | 16% | 0.046 | 0.995 | 2.25 | 1.49 | 7 | 4 | 0 | 0 | 100% | 1 |