Ligand validation:7PKI

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 7PKI designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
7PKI_NAG_A_701	48%	87%	0.19	0.933	0.24	0.45	-	-	0	0	100%	0.9333
7PKI_NAG_E_1701	41%	88%	0.211	0.929	0.22	0.43	-	-	1	0	100%	0.9333
7PKI_NAG_A_704	34%	86%	0.202	0.887	0.34	0.37	-	-	0	0	100%	0.9333
7PKI_NAG_A_702	7%	88%	0.402	0.851	0.29	0.37	-	-	0	0	100%	0.9333
7PKI_NAG_E_1702	6%	28%	0.431	0.858	0.7	2.16	1	5	1	0	100%	0.9333
7PKI_NAG_A_703	1%	85%	0.489	0.665	0.31	0.43	-	-	0	0	100%	0.9333
8DF5_NAG_F_1202	73%	76%	0.132	0.959	0.21	0.71	-	1	0	0	100%	0.9333
7RPV_NAG_A_1004	60%	41%	0.146	0.932	1.05	1.22	1	1	0	0	100%	0.9333
8SPH_NAG_B_707	58%	87%	0.141	0.921	0.29	0.41	-	-	1	0	100%	0.9333
7DMU_NAG_C_801	55%	61%	0.113	0.879	1.05	0.46	2	-	0	0	100%	0.9333
7EKE_NAG_B_601	53%	84%	0.14	0.9	0.24	0.52	-	-	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_A_601	100%	70%	0.024	0.993	0.3	0.85	-	-	0	0	100%	0.9333
5U7O_NAG_B_704	100%	88%	0.024	0.989	0.23	0.44	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.