RCSB PDB - BRU Ligand Summary Page

BRU

5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE

Created:1999-07-08
Last modified:  2011-06-04

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Chemical Details

Formal Charge0
Atom Count33
Chiral Atom Count3
Bond Count34
Aromatic Bond Count0
2D diagram of BRU

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Chemical Component Summary

Name5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
Systematic Name (OpenEye OEToolkits)[(2R,3S,5R)-5-(5-bromo-2,4-dioxo-pyrimidin-1-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate
FormulaC9 H12 Br N2 O8 P
Molecular Weight387.078
TypeDNA LINKING

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs10.04BrC=1C(=O)NC(=O)N(C=1)C2OC(C(O)C2)COP(=O)(O)O
SMILESCACTVS3.341O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)N2C=C(Br)C(=O)NC2=O
SMILESOpenEye OEToolkits1.5.0C1C(C(OC1N2C=C(C(=O)NC2=O)Br)COP(=O)(O)O)O
Canonical SMILESCACTVS3.341 O[C@H]1C[C@@H](O[C@@H]1CO[P](O)(O)=O)N2C=C(Br)C(=O)NC2=O
Canonical SMILESOpenEye OEToolkits1.5.0 C1[C@@H]([C@H](O[C@H]1N2C=C(C(=O)NC2=O)Br)COP(=O)(O)O)O
InChIInChI1.03 InChI=1S/C9H12BrN2O8P/c10-4-2-12(9(15)11-8(4)14)7-1-5(13)6(20-7)3-19-21(16,17)18/h2,5-7,13H,1,3H2,(H,11,14,15)(H2,16,17,18)/t5-,6+,7+/m0/s1
InChIKeyInChI1.03 LHLHVDBXXZVYJT-RRKCRQDMSA-N

Drug Info: DrugBank

DrugBank IDDB01903 
Name5-Bromo-2'-deoxyuridine 5'-(dihydrogen phosphate)
Groups experimental
Synonyms5-Bromo-2'-deoxyuridine 5'-(dihydrogen phosphate)
CAS number51432-32-7

Drug Targets

NameTarget SequencePharmacological ActionActions
Thymidylate synthase ThyXMKIDILDKGFVELVDVMGNDLSAVRAARVSFDMGLKDEERDRHLIEYLMK...unknown
Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID:21059682

Related Resource References

Resource NameReference
PubChem 93036
ChEMBL CHEMBL1160593