RCSB PDB - FN5 Ligand Summary Page

FN5

CMP-3F(a)-Neu5Ac

Created:2011-06-15
Last modified:  2011-06-15

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Chemical Details

Formal Charge0
Atom Count69
Chiral Atom Count11
Bond Count71
Aromatic Bond Count0
2D diagram of FN5

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Chemical Component Summary

NameCMP-3F(a)-Neu5Ac
Systematic Name (OpenEye OEToolkits)[(2S,3R,4R,5R,6R)-5-acetamido-3-fluoranyl-4-oxidanyl-6-[(1R,2R)-1,2,3-tris(oxidanyl)propyl]oxan-2-yl] [(2R,3S,4R,5R)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
FormulaC19 H30 F N4 O14 P
Molecular Weight588.432
TypeNON-POLYMER

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs12.01O=C1N=C(N)C=CN1C2OC(C(O)C2O)COP(=O)(O)OC3OC(C(NC(=O)C)C(O)C3F)C(O)C(O)CO
SMILESCACTVS3.370CC(=O)N[CH]1[CH](O)[CH](F)[CH](O[CH]1[CH](O)[CH](O)CO)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=NC3=O)N
SMILESOpenEye OEToolkits1.7.2CC(=O)NC1C(C(C(OC1C(C(CO)O)O)OP(=O)(O)OCC2C(C(C(O2)N3C=CC(=NC3=O)N)O)O)F)O
Canonical SMILESCACTVS3.370 CC(=O)N[C@@H]1[C@@H](O)[C@@H](F)[C@@H](O[C@H]1[C@H](O)[C@H](O)CO)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)N3C=CC(=NC3=O)N
Canonical SMILESOpenEye OEToolkits1.7.2 CC(=O)N[C@@H]1[C@H]([C@H]([C@@H](O[C@H]1[C@@H]([C@@H](CO)O)O)O[P@@](=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)N3C=CC(=NC3=O)N)O)O)F)O
InChIInChI1.03 InChI=1S/C19H30FN4O14P/c1-6(26)22-11-14(30)10(20)18(37-16(11)12(28)7(27)4-25)38-39(33,34)35-5-8-13(29)15(31)17(36-8)24-3-2-9(21)23-19(24)32/h2-3,7-8,10-18,25,27-31H,4-5H2,1H3,(H,22,26)(H,33,34)(H2,21,23,32)/t7-,8-,10-,11-,12-,13-,14+,15-,16-,17-,18+/m1/s1
InChIKeyInChI1.03 DLSXHRIQCIXYOE-DOSPZCANSA-N

Related Resource References

Resource NameReference
PubChem 137349356