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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Cupido, T."

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Search Summary

This query matches 8 Structures.

Refinements

Structure Determination Methodology

experimental (8)

Scientific Name of Source Organism

	Drosophila melanogaster (7)
	Homo sapiens (1)

Taxonomy

Eukaryota (8)

Experimental Method

X-RAY DIFFRACTION (8)

Polymer Entity Type

Protein (8)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (5)
	2.5 - 3.0 (1)

Release Date

	2015 - 2019 (7)
	2020 - 2024 (1)

Enzyme Classification Name

	Isomerases (7)
	Hydrolases (1)

Symmetry Type

Asymmetric (8)

SCOP Classification

Alpha and beta proteins (a/b) (7)

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1 to 8 of 8 Structures

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6NYV \| pdb_00006nyv	Download File View File

Structure of spastin AAA domain in complex with a quinazoline-based inhibitor

Pisa, R., Cupido, T., Kapoor, T.M.

(2019) J Am Chem Soc 141: 5602-5606

Released	2019-03-27
Method	X-RAY DIFFRACTION 2.425 Å
Organisms	Drosophila melanogaster
Macromolecule	Spastin (protein)
Unique Ligands	LBD, MPD, SO4

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6NYW \| pdb_00006nyw	Download File View File

Structure of spastin AAA domain N527C mutant in complex with 8-fluoroquinazoline-based inhibitor

Pisa, R., Cupido, T., Kapoor, T.M.

(2019) J Am Chem Soc 141: 5602-5606

Released	2019-03-27
Method	X-RAY DIFFRACTION 2.189 Å
Organisms	Drosophila melanogaster
Macromolecule	Spastin (protein)
Unique Ligands	ACT, L8M, MPD, SO4

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6P10 \| pdb_00006p10	Download File View File

Structure of spastin AAA domain (N527C mutant) in complex with JNJ-7706621 inhibitor

Pisa, R., Cupido, T., Kapoor, T.M.

(2019) Cell Chem Biol 26: 1263

Released	2019-07-24
Method	X-RAY DIFFRACTION 2.301 Å
Organisms	Drosophila melanogaster
Macromolecule	Drosophila melanogaster Spastin AAA domain (protein)
Unique Ligands	MPD, SKE, SO4

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6P11 \| pdb_00006p11	Download File View File

Structure of spastin AAA domain (T692A mutant) in complex with JNJ-7706621 inhibitor

Pisa, R., Cupido, T., Kapoor, T.M.

(2019) Cell Chem Biol 26: 1263

Released	2019-07-24
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Drosophila melanogaster
Macromolecule	Drosophila melanogaster Spastin AAA domain (protein)
Unique Ligands	MPD, SKE, SO4

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6P12 \| pdb_00006p12	Download File View File

Structure of spastin AAA domain (wild-type) in complex with diaminotriazole-based inhibitor

Pisa, R., Cupido, T., Kapoor, T.M.

(2019) Cell Chem Biol 26: 1263

Released	2019-07-24
Method	X-RAY DIFFRACTION 1.9413185678 Å
Organisms	Drosophila melanogaster
Macromolecule	Drosophila melanogaster Spastin AAA domain (protein)
Unique Ligands	MPD, NKY, SO4

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6P13 \| pdb_00006p13	Download File View File

Structure of spastin AAA domain (T692A mutant) in complex with a diaminotriazole-based inhibitor (crystal form A)

Pisa, R., Cupido, T., Kapoor, T.M.

(2019) Cell Chem Biol 26: 1263

Released	2019-08-07
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Drosophila melanogaster
Macromolecule	Spastin (protein)
Unique Ligands	MPD, NKY, SO4

Explore in 3D

6P14 \| pdb_00006p14	Download File View File

Structure of spastin AAA domain (T692A mutant) in complex with a diaminotriazole-based inhibitor (crystal form B)

Pisa, R., Cupido, T., Kapoor, T.M.

(2019) Cell Chem Biol 26: 1263

Released	2019-07-24
Method	X-RAY DIFFRACTION 1.93001125684 Å
Organisms	Drosophila melanogaster
Macromolecule	Spastin (protein)
Unique Ligands	ACT, MPD, NKY, SO4

Explore in 3D

7L9X \| pdb_00007l9x	Download File View File

Structure of VPS4B in complex with an allele-specific covalent inhibitor

Grasso, M., Cupido, T., Kapoor, T.M.

(2021) Nat Struct Mol Biol 28: 388-397

Released	2021-04-14
Method	X-RAY DIFFRACTION 2.81 Å
Organisms	Homo sapiens
Macromolecule	Vacuolar protein sorting-associated protein 4B (protein)
Unique Ligands	SO4, XQV

1 to 8 of 8 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

6NYV | pdb_00006nyv

Structure of spastin AAA domain in complex with a quinazoline-based inhibitor

6NYW | pdb_00006nyw

Structure of spastin AAA domain N527C mutant in complex with 8-fluoroquinazoline-based inhibitor

6P10 | pdb_00006p10

Structure of spastin AAA domain (N527C mutant) in complex with JNJ-7706621 inhibitor

6P11 | pdb_00006p11

Structure of spastin AAA domain (T692A mutant) in complex with JNJ-7706621 inhibitor

6P12 | pdb_00006p12

Structure of spastin AAA domain (wild-type) in complex with diaminotriazole-based inhibitor

6P13 | pdb_00006p13

Structure of spastin AAA domain (T692A mutant) in complex with a diaminotriazole-based inhibitor (crystal form A)

6P14 | pdb_00006p14

Structure of spastin AAA domain (T692A mutant) in complex with a diaminotriazole-based inhibitor (crystal form B)

7L9X | pdb_00007l9x

Structure of VPS4B in complex with an allele-specific covalent inhibitor

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

6NYV | pdb_00006nyv

6NYW | pdb_00006nyw

6P10 | pdb_00006p10

6P11 | pdb_00006p11

6P12 | pdb_00006p12

6P13 | pdb_00006p13

6P14 | pdb_00006p14

7L9X | pdb_00007l9x