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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Dean, A.M."

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Search Summary

This query matches 13 Structures.

Refinements

Structure Determination Methodology

experimental (13)

Scientific Name of Source Organism

	Escherichia coli (9)
	Escherichia coli K-12 (4)

Taxonomy

Bacteria (13)

Experimental Method

X-RAY DIFFRACTION (13)

Polymer Entity Type

Protein (13)

Refinement Resolution (Å)

	1.5 - 2.0 (4)
	2.0 - 2.5 (3)
	2.5 - 3.0 (6)

Release Date

	1990 - 1994 (6)
	2010 - 2014 (7)

Enzyme Classification Name

Oxidoreductases (13)

Symmetry Type

Cyclic (13)

SCOP Classification

Alpha and beta proteins (a/b) (13)

AllSelected

1 to 13 of 13 Structures

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Explore in 3D

4AJ3 \| pdb_00004aj3	Download File View File

3D structure of E. coli Isocitrate Dehydrogenase in complex with Isocitrate, calcium(II) and NADP - The pseudo-Michaelis complex

Goncalves, S., Miller, S.P., Carrondo, M.A., Dean, A.M., Matias, P.M.

(2012) Biochemistry 51: 7098

Released	2012-10-31
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli K-12
Macromolecule	NADP ISOCITRATE DEHYDROGENASE (protein)
Unique Ligands	CA, ICT, NAP

Explore in 3D

4AJA \| pdb_00004aja	Download File View File

3D structure of E. coli Isocitrate Dehydrogenase in complex with Isocitrate, calcium(II) and thioNADP

Goncalves, S., Miller, S.P., Carrondo, M.A., Dean, A.M., Matias, P.M.

(2012) Biochemistry 51: 7098

Released	2012-10-31
Method	X-RAY DIFFRACTION 1.799 Å
Organisms	Escherichia coli
Macromolecule	NADP ISOCITRATE DEHYDROGENASE (protein)
Unique Ligands	CA, ICT, SO4, TAP

Explore in 3D

4AJB \| pdb_00004ajb	Download File View File

3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with Isocitrate, magnesium(II) and thioNADP

Goncalves, S., Miller, S.P., Carrondo, M.A., Dean, A.M., Matias, P.M.

(2012) Biochemistry 51: 7098

Released	2012-10-31
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli
Macromolecule	NADP ISOCITRATE DEHYDROGENASE (protein)
Unique Ligands	ICT, MG, SO4, TAP

Explore in 3D

4AJC \| pdb_00004ajc	Download File View File

3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with alpha-ketoglutarate, calcium(II) and adenine nucleotide phosphate

Goncalves, S., Miller, S.P., Carrondo, M.A., Dean, A.M., Matias, P.M.

(2012) Biochemistry 51: 7098

Released	2012-10-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	NADP ISOCITRATE DEHYDROGENASE (protein)
Unique Ligands	A2P, AKG, CA, SO4

Explore in 3D

4AJR \| pdb_00004ajr	Download File View File

3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with alpha-ketoglutarate, magnesium(II) and NADPH - The product complex

Goncalves, S., Miller, S.P., Carrondo, M.A., Dean, A.M., Matias, P.M.

(2012) Biochemistry 51: 7098

Released	2012-10-31
Method	X-RAY DIFFRACTION 2.687 Å
Organisms	Escherichia coli K-12
Macromolecule	ISOCITRATE DEHYDROGENASE [NADP] (protein)
Unique Ligands	AKG, MG, NAP, NMN

Explore in 3D

4AJS \| pdb_00004ajs	Download File View File

3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with isocitrate, magnesium(II), Adenosine 2',5'-biphosphate and ribosylnicotinamide-5'-phosphate

Goncalves, S., Miller, S.P., Carrondo, M.A., Dean, A.M., Matias, P.M.

(2012) Biochemistry 51: 7098

Released	2012-10-31
Method	X-RAY DIFFRACTION 1.802 Å
Organisms	Escherichia coli K-12
Macromolecule	ISOCITRATE DEHYDROGENASE [NADP] (protein)
Unique Ligands	A2P, ICT, MG, NMN, SO4

Explore in 3D

4BNP \| pdb_00004bnp	Download File View File

3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with isocitrate and magnesium(II)

Miller, S.P., Goncalves, S., Matias, P.M., Dean, A.M.

(2014) Chembiochem 15: 1145

Released	2014-05-21
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli K-12
Macromolecule	ISOCITRATE DEHYDROGENASE [NADP] (protein)
Unique Ligands	ICT, MG, SO4

Explore in 3D

4ICD \| pdb_00004icd	Download File View File

REGULATION OF ISOCITRATE DEHYDROGENASE BY PHOSPHORYLATION INVOLVES NO LONG-RANGE CONFORMATIONAL CHANGE IN THE FREE ENZYME

Hurley, J.H., Dean, A.M., Thorsness, P.E., Koshlandjunior, D.E., Stroud, R.M.

(1990) J Biological Chem 265: 3599-3602

Released	1991-01-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	PHOSPHORYLATED ISOCITRATE DEHYDROGENASE (protein)

Explore in 3D

5ICD \| pdb_00005icd	Download File View File

REGULATION OF AN ENZYME BY PHOSPHORYLATION AT THE ACTIVE SITE

Hurley, J.H., Dean, A.M., Sohl, J.L., Koshlandjunior, D.E., Stroud, R.M.

(1990) Science 249: 1012-1016

Released	1991-10-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	ISOCITRATE DEHYDROGENASE (protein)
Unique Ligands	ICT, MG

Explore in 3D

6ICD \| pdb_00006icd	Download File View File

REGULATION OF AN ENZYME BY PHOSPHORYLATION AT THE ACTIVE SITE

Hurley, J.H., Dean, A.M., Sohl, J.L., Koshlandjunior, D.E., Stroud, R.M.

(1990) Science 249: 1012-1016

Released	1991-10-15
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli
Macromolecule	ISOCITRATE DEHYDROGENASE (protein)

Explore in 3D

7ICD \| pdb_00007icd	Download File View File

REGULATION OF AN ENZYME BY PHOSPHORYLATION AT THE ACTIVE SITE

Hurley, J.H., Dean, A.M., Sohl, J.L., Koshlandjunior, D.E., Stroud, R.M.

(1990) Science 249: 1012-1016

Released	1991-10-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	ISOCITRATE DEHYDROGENASE (protein)

Explore in 3D

8ICD \| pdb_00008icd	Download File View File

REGULATION OF AN ENZYME BY PHOSPHORYLATION AT THE ACTIVE SITE

Hurley, J.H., Dean, A.M., Sohl, J.L., Koshlandjunior, D.E., Stroud, R.M.

(1990) Science 249: 1012-1016

Released	1991-10-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	ISOCITRATE DEHYDROGENASE (protein)
Unique Ligands	ICT, MG

Explore in 3D

9ICD \| pdb_00009icd	Download File View File

CATALYTIC MECHANISM OF NADP+-DEPENDENT ISOCITRATE DEHYDROGENASE: IMPLICATIONS FROM THE STRUCTURES OF MAGNESIUM-ISOCITRATE AND NADP+ COMPLEXES

Hurley, J.H., Dean, A.M., Koshland Jr., D.E., Stroud, R.M.

(1991) Biochemistry 30: 8671-8678

Released	1991-10-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	ISOCITRATE DEHYDROGENASE (protein)
Unique Ligands	NAP

1 to 13 of 13 Structures

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4AJ3 | pdb_00004aj3

3D structure of E. coli Isocitrate Dehydrogenase in complex with Isocitrate, calcium(II) and NADP - The pseudo-Michaelis complex

4AJA | pdb_00004aja

3D structure of E. coli Isocitrate Dehydrogenase in complex with Isocitrate, calcium(II) and thioNADP

4AJB | pdb_00004ajb

3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with Isocitrate, magnesium(II) and thioNADP

4AJC | pdb_00004ajc

3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with alpha-ketoglutarate, calcium(II) and adenine nucleotide phosphate

4AJR | pdb_00004ajr

3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with alpha-ketoglutarate, magnesium(II) and NADPH - The product complex

4AJS | pdb_00004ajs

3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with isocitrate, magnesium(II), Adenosine 2',5'-biphosphate and ribosylnicotinamide-5'-phosphate

4BNP | pdb_00004bnp

3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with isocitrate and magnesium(II)

4ICD | pdb_00004icd

REGULATION OF ISOCITRATE DEHYDROGENASE BY PHOSPHORYLATION INVOLVES NO LONG-RANGE CONFORMATIONAL CHANGE IN THE FREE ENZYME

5ICD | pdb_00005icd

REGULATION OF AN ENZYME BY PHOSPHORYLATION AT THE ACTIVE SITE

6ICD | pdb_00006icd

REGULATION OF AN ENZYME BY PHOSPHORYLATION AT THE ACTIVE SITE

7ICD | pdb_00007icd

REGULATION OF AN ENZYME BY PHOSPHORYLATION AT THE ACTIVE SITE

8ICD | pdb_00008icd

REGULATION OF AN ENZYME BY PHOSPHORYLATION AT THE ACTIVE SITE

9ICD | pdb_00009icd

CATALYTIC MECHANISM OF NADP+-DEPENDENT ISOCITRATE DEHYDROGENASE: IMPLICATIONS FROM THE STRUCTURES OF MAGNESIUM-ISOCITRATE AND NADP+ COMPLEXES

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

4AJ3 | pdb_00004aj3

4AJA | pdb_00004aja

4AJB | pdb_00004ajb

4AJC | pdb_00004ajc

4AJR | pdb_00004ajr

4AJS | pdb_00004ajs

4BNP | pdb_00004bnp

4ICD | pdb_00004icd

5ICD | pdb_00005icd

6ICD | pdb_00006icd

7ICD | pdb_00007icd

8ICD | pdb_00008icd

9ICD | pdb_00009icd