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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Drenth, J."

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Search Summary

This query matches 71 Structures.

Refinements

Structure Determination Methodology

experimental (71)

Scientific Name of Source Organism

	Homo sapiens (45)
	Mammalian orthorubulavirus 5 (8)
	Human herpesvirus 4 strain B95-8 (4)
	Simian virus 5 (strain W3) (4)
	Human metapneumovirus A (3)
	Human respirovirus 3 (3)
	Rattus norvegicus (3)
	human gammaherpesvirus 4 (3)
	Escherichia coli (2)
	Human respiratory syncytial virus A2 (2)

More...

Taxonomy

	Eukaryota (48)
	Riboviria (26)
	Duplodnaviria (7)
	Bacteria (5)
	other sequences (2)
	Riboviria (RNA viruses and viroids) (1)

Experimental Method

	X-RAY DIFFRACTION (63)
	ELECTRON MICROSCOPY (8)

Polymer Entity Type

Protein (71)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (4)
	2.0 - 2.5 (15)
	2.5 - 3.0 (17)
	3.0 - 3.5 (24)
	3.5 - 4.0 (5)
	4.0 - 4.5 (3)
	> 4.5 (1)

Release Date

	1990 - 1994 (4)
	1995 - 1999 (7)
	2000 - 2004 (10)
	2005 - 2009 (17)
	2010 - 2014 (11)
	2015 - 2019 (9)
	2020 - 2024 (13)

Enzyme Classification Name

	Hydrolases (11)
	Transferases (3)
	Isomerases (1)
	Lyases (1)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (33)
	Cyclic (41)

SCOP Classification

	All beta proteins (31)
	Alpha and beta proteins (a+b) (13)
	Small proteins (4)
	Artifacts (2)
	Coiled coil proteins (1)
	Alpha and beta proteins (a/b) (1)

AllSelected

1 to 25 of 71 Structures

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1AQD	Download File View File

HLA-DR1 (DRA, DRB1 0101) HUMAN CLASS II HISTOCOMPATIBILITY PROTEIN (EXTRACELLULAR DOMAIN) COMPLEXED WITH ENDOGENOUS PEPTIDE

Murthy, V.L., Stern, L.J.

(1997) Structure 5: 1385-1396

Released	1998-01-28
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens
Macromolecule	HLA-A2 (protein) HLA-DR1 CLASS II HISTOCOMPATIBILITY PROTEIN (protein)

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1BXT	Download File View File

STREPTOCOCCAL SUPERANTIGEN (SSA) FROM STREPTOCOCCUS PYOGENES

Sundberg, E., Jardetzky, T.

(1999) Nat Struct Biol 6: 123-129

Released	1998-10-14
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Streptococcus pyogenes
Macromolecule	PROTEIN (STREPTOCOCCAL SUPERANTIGEN) (protein)

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1DLH	Download File View File

CRYSTAL STRUCTURE OF THE HUMAN CLASS II MHC PROTEIN HLA-DR1 COMPLEXED WITH AN INFLUENZA VIRUS PEPTIDE

Stern, L.J.

(1994) Nature 368: 215-221

Released	1994-06-22
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens Influenza A virus (strain A/England/878/1969 H3N2)
Macromolecule	CLASS II HISTOCOMPATIBILITY ANTIGEN (HLA-DR1) (ALPHA CHAIN) (protein) CLASS II HISTOCOMPATIBILITY ANTIGEN (HLA-DR1) (BETA CHAIN) (protein) ENTEROTOXIN TYPE B PRECURSOR (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG, NDG

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1ESF	Download File View File

STAPHYLOCOCCAL ENTEROTOXIN A

Schad, E.M., Svensson, L.A.

(1995) EMBO J 14: 3292-3301

Released	1996-07-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL ENTEROTOXIN A (protein)
Unique Ligands	CD

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1F2Q	Download File View File

CRYSTAL STRUCTURE OF THE HUMAN HIGH-AFFINITY IGE RECEPTOR

Garman, S.C., Kinet, J.P., Jardetzky, T.S.

(1998) Cell 95: 951-961

Released	2000-06-08
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR ALPHA-SUBUNIT (protein)
Unique Ligands	NAG
Unique branched monosaccharides	MAN, NAG

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1F6A	Download File View File

Structure of the human ige-fc bound to its high affinity receptor fc(epsilon)ri(alpha)

Garman, S.C., Wurzburg, B.A., Tarchevskaya, S.S., Kinet, J.P., Jardetzky, T.S.

(2000) Nature 406: 259-266

Released	2000-07-20
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Homo sapiens
Macromolecule	HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR ALPHA-SUBUNIT (protein) IG EPSILON CHAIN C REGION (protein)
Unique Ligands	CPS, SO4
Unique branched monosaccharides	FUC, MAN, NAG

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1FP5	Download File View File

CRYSTAL STRUCTURE ANALYSIS OF THE HUMAN IGE-FC CEPSILON3-CEPSILON4 FRAGMENT.

Wurzburg, B.A., Garman, S.C., Jardetzky, T.S.

(2000) Immunity 13: 375-385

Released	2000-09-27
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	IGE HEAVY CHAIN EPSILON-1 (protein)

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1HSA	Download File View File

THE THREE-DIMENSIONAL STRUCTURE OF HLA-B27 AT 2.1 ANGSTROMS RESOLUTION SUGGESTS A GENERAL MECHANISM FOR TIGHT PEPTIDE BINDING TO MHC

Madden, D.R., Gorga, J.C., Strominger, J.L., Wiley, D.C.

(1992) Cell 70: 1035-1048

Released	1992-10-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	BETA 2-MICROGLOBULIN (protein) CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-B*2705) (protein) MODEL PEPTIDE SEQUENCE - ARAAAAAAA (protein)

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1HSB	Download File View File

DIFFERENT LENGTH PEPTIDES BIND TO HLA-AW68 SIMILARLY AT THEIR ENDS BUT BULGE OUT IN THE MIDDLE

Guo, H.-C., Strominger, J.L., Wiley, D.C.

(1992) Nature 360: 364-366

Released	1993-10-31
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	BOUND PEPTIDE FRAGMENT (protein) Beta-2-microglobulin (protein) MHC class I antigen (protein)
Unique Ligands	ALA, ARG

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1J86	Download File View File

HUMAN HIGH AFFINITY FC RECEPTOR FC(EPSILON)RI(ALPHA), MONOCLINIC CRYSTAL FORM 2

Garman, S.C., Sechi, S., Kinet, J.P., Jardetzky, T.S.

(2001) J Mol Biol 311: 1049-1062

Released	2001-08-29
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR ALPHA-SUBUNIT (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, FCA, MAN, NAG

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1J87	Download File View File

HUMAN HIGH AFFINITY FC RECEPTOR FC(EPSILON)RI(ALPHA), HEXAGONAL CRYSTAL FORM 1

Garman, S.C., Sechi, S., Kinet, J.P., Jardetzky, T.S.

(2001) J Mol Biol 311: 1049-1062

Released	2001-08-29
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR ALPHA-SUBUNIT (protein)
Unique branched monosaccharides	BMA, FUC, MAN, NAG

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1J88	Download File View File

HUMAN HIGH AFFINITY FC RECEPTOR FC(EPSILON)RI(ALPHA), TETRAGONAL CRYSTAL FORM 1

Garman, S.C., Sechi, S., Kinet, J.P., Jardetzky, T.S.

(2001) J Mol Biol 311: 1049-1062

Released	2001-08-29
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR ALPHA-SUBUNIT (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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1J89	Download File View File

HUMAN HIGH AFFINITY FC RECEPTOR FC(EPSILON)RI(ALPHA), TETRAGONAL CRYSTAL FORM 2

Garman, S.C., Sechi, S., Kinet, J.P., Jardetzky, T.S.

(2001) J Mol Biol 311: 1049-1062

Released	2001-08-29
Method	X-RAY DIFFRACTION 4.1 Å
Organisms	Homo sapiens
Macromolecule	HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR ALPHA-SUBUNIT (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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1KG0	Download File View File

Structure of the Epstein-Barr Virus gp42 Protein Bound to the MHC class II Receptor HLA-DR1

Mullen, M.M., Haan, K.M., Longnecker, R., Jardetzky, T.S.

(2002) Mol Cell 9: 375-385

Released	2002-03-27
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens human gammaherpesvirus 4 synthetic construct
Macromolecule	Hemagglutinin HA Peptide (protein) MHC class II Receptor HLA-DR1 (protein) gp42 Protein (protein)

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1NYS	Download File View File

Crystal Structure of Activin A Bound to the ECD of ActRIIB P41

Thompson, T.B., Woodruff, T.K., Jardetzky, T.S.

(2003) EMBO J 22: 1555-1566

Released	2003-04-08
Method	X-RAY DIFFRACTION 3.05 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Inhibin beta A chain (protein) activin receptor (protein)

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1NYU	Download File View File

Crystal Structure of Activin A Bound to the ECD of ActRIIB

Thompson, T.B., Woodruff, T.K., Jardetzky, T.S.

(2003) EMBO J 22: 1555-1566

Released	2003-04-08
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Inhibin beta A chain (protein) activin receptor (protein)

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1PII	Download File View File

THREE-DIMENSIONAL STRUCTURE OF THE BIFUNCTIONAL ENZYME PHOSPHORIBOSYLANTHRANILATE ISOMERASE: INDOLEGLYCEROLPHOSPHATE SYNTHASE FROM ESCHERICHIA COLI REFINED AT 2.0 ANGSTROMS RESOLUTION

Wilmanns, M., Priestle, J.P., Jansonius, J.N.

(1992) J Mol Biol 223: 477-507

Released	1994-01-31
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	N-(5'PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (protein)
Unique Ligands	PO4

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1SEB	Download File View File

COMPLEX OF THE HUMAN MHC CLASS II GLYCOPROTEIN HLA-DR1 AND THE BACTERIAL SUPERANTIGEN SEB

Jardetzky, T.S., Brown, J.H., Gorga, J.C., Stern, L.J., Urban, R.G., Chi, Y.I., Stauffacher, C., Strominger, J.L., Wiley, D.C.

(1994) Nature 368: 711-718

Released	1996-06-20
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens Staphylococcus aureus
Macromolecule	ENDOGENOUS PEPTIDE MODEL, POLY-ALA (protein) ENTEROTOXIN TYPE B (protein) HLA CLASS II HISTOCOMPATIBILITY ANTIGEN (protein)

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1SVF	Download File View File

PARAMYXOVIRUS SV5 FUSION PROTEIN CORE

Baker, K.A., Dutch, R.E., Lamb, R.A., Jardetzky, T.S.

(1999) Mol Cell 3: 309-319

Released	1999-03-26
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Simian virus 5 (strain W3)
Macromolecule	PROTEIN (FUSION GLYCOPROTEIN) (protein)
Unique Ligands	CL

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1TMC	Download File View File

THE THREE-DIMENSIONAL STRUCTURE OF A CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX MOLECULE MISSING THE ALPHA3 DOMAIN OF THE HEAVY CHAIN

Collins, E.J., Garboczi, D.N., Karpusas, M.N., Wiley, D.C.

(1995) Proc Natl Acad Sci U S A 92: 1218-1221

Released	1995-03-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	BETA 2-MICROGLOBULIN (protein) CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-AW68) (protein) DECAMERIC PEPTIDE (EVAPPEYHRK) (protein)

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1Z4V	Download File View File

Parainfluenza Virus 5 (SV5) Hemagglutinin-Neuraminidase (HN) with ligand DANA (soaked with DANA, pH 7.0)

Yuan, P., Thompson, T.B., Wurzburg, B.A., Paterson, R.G., Lamb, R.A., Jardetzky, T.S.

(2005) Structure 13: 803-815

Released	2005-05-24
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mammalian orthorubulavirus 5
Macromolecule	Hemagglutinin-neuraminidase (protein)
Unique Ligands	CA, DAN, NAG
Unique branched monosaccharides	NAG

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1Z4W	Download File View File

Parainfluenza Virus 5 (SV5) Hemagglutinin-Neuraminidase (HN) with ligand DANA (soaked with DANA, pH8.0)

Yuan, P., Thompson, T.B., Wurzburg, B.A., Paterson, R.G., Lamb, R.A., Jardetzky, T.S.

(2005) Structure 13: 803-815

Released	2005-05-24
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mammalian orthorubulavirus 5
Macromolecule	Hemagglutinin-neuraminidase (protein)
Unique Ligands	CA, DAN, NAG
Unique branched monosaccharides	NAG

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1Z4X	Download File View File

Parainfluenza Virus 5 (SV5) Hemagglutinin-Neuraminidase (HN) with ligand Sialyllactose (soaked with Sialyllactose, pH8.0)

Yuan, P., Thompson, T.B., Wurzburg, B.A., Paterson, R.G., Lamb, R.A., Jardetzky, T.S.

(2005) Structure 13: 803-815

Released	2005-05-24
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mammalian orthorubulavirus 5
Macromolecule	Hemagglutinin-neuraminidase (protein)
Unique Ligands	CA, NAG
Unique branched monosaccharides	GAL, GLC, NAG, SIA

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1Z4Y	Download File View File

Parainfluenza Virus 5 (SV5) Hemagglutinin-Neuraminidase (HN) (pH 8.0)

Yuan, P., Thompson, T.B., Wurzburg, B.A., Paterson, R.G., Lamb, R.A., Jardetzky, T.S.

(2005) Structure 13: 803-815

Released	2005-05-24
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Mammalian orthorubulavirus 5
Macromolecule	Hemagglutinin-neuraminidase (protein)
Unique Ligands	CA, NAG
Unique branched monosaccharides	NAG

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1Z4Z	Download File View File

Parainfluenza Virus 5 (SV5) Hemagglutinin-Neuraminidase (HN) with ligand DANA(soaked with sialic acid, pH7.0))

Yuan, P., Thompson, T.B., Wurzburg, B.A., Paterson, R.G., Lamb, R.A., Jardetzky, T.S.

(2005) Structure 13: 803-815

Released	2005-05-24
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mammalian orthorubulavirus 5
Macromolecule	Hemagglutinin-neuraminidase (protein)
Unique Ligands	CA, DAN, NAG
Unique branched monosaccharides	NAG

1 to 25 of 71 Structures

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